Your message dated Tue, 07 Feb 2023 08:40:24 +0000
with message-id <e1ppjwa-0041hm...@fasolo.debian.org>
and subject line Bug#1022278: fixed in sagemath 9.5-5
has caused the Debian Bug report #1022278,
regarding sagemath: FTBFS: make[3]: *** [debian/rules:84: 
override_dh_auto_build-indep] Error 1
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
1022278: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1022278
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: sagemath
Version: 9.5-4
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20221023 ftbfs-bookworm

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> make[3]: Entering directory '/<<PKGBUILDDIR>>'
> cd sage && SAGE_ROOT=/<<PKGBUILDDIR>>/sage 
> PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/<<PKGBUILDDIR>>/sage/build/bin
>  src/doc/bootstrap
> mv sage/src/sage sage/src/sage.bak # Use the installed sage, not the one from 
> the source tree
> cd sage/src && \
> export 
> PYTHONPATH=/<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.10/dist-packages \
>        SAGE_SRC=/<<PKGBUILDDIR>>/sage/src \
>        SAGE_DOC_SRC=/<<PKGBUILDDIR>>/sage/src/doc \
>        SAGE_DOC=/<<PKGBUILDDIR>>/sage/src/doc \
>        MATHJAX_DIR=/usr/share/javascript/mathjax \
>        LANG=C && \
> python3 -m sage_docbuild --no-pdf-links --mathjax all html
> /<<PKGBUILDDIR>>/sage/src/sage_docbuild/__init__.py:1728: DeprecationWarning: 
> avoid using "sage --docbuild all html" and "sage --docbuild all pdf"; use 
> "make doc" and "make doc-pdf" instead, if available.
> See https://trac.sagemath.org/31948 for details.
>   builder = getattr(get_builder(name), typ)
> 
> Building reference manual, first pass.
> 
> [reference] building [inventory]: targets for 1 source files that are out of 
> date
> [reference] updating environment: [new config] 1 added, 0 changed, 0 removed
> [reference] The inventory files are in doc/inventory/en/reference/references.
> Build finished. The built documents can be found in 
> /<<PKGBUILDDIR>>/sage/src/doc/inventory/en/reference/references
> [dynamics ] building [inventory]: targets for 16 source files that are out of 
> date
> [dynamics ] updating environment: [new config] 16 added, 0 changed, 0 removed
> [tensor_fr] building [inventory]: targets for 19 source files that are out of 
> date
> [tensor_fr] updating environment: [new config] 19 added, 0 changed, 0 removed
> [polynomia] building [inventory]: targets for 62 source files that are out of 
> date
> [polynomia] updating environment: [new config] 62 added, 0 changed, 0 removed
> [spkg     ] building [inventory]: targets for 355 source files that are out 
> of date
> [spkg     ] updating environment: [new config] 355 added, 0 changed, 0 removed
> [repl     ] building [inventory]: targets for 36 source files that are out of 
> date
> [repl     ] updating environment: [new config] 36 added, 0 changed, 0 removed
> [algebras ] building [inventory]: targets for 99 source files that are out of 
> date
> [algebras ] updating environment: [new config] 99 added, 0 changed, 0 removed
> [combinat ] building [inventory]: targets for 369 source files that are out 
> of date
> [combinat ] updating environment: [new config] 369 added, 0 changed, 0 removed
> [manifolds] building [inventory]: targets for 84 source files that are out of 
> date
> [manifolds] updating environment: [new config] 84 added, 0 changed, 0 removed
> [tensor_fr] The inventory files are in 
> doc/inventory/en/reference/tensor_free_modules.
> Build finished. The built documents can be found in 
> /<<PKGBUILDDIR>>/sage/src/doc/inventory/en/reference/tensor_free_modules
> [repl     ] The inventory files are in doc/inventory/en/reference/repl.
> Build finished. The built documents can be found in 
> /<<PKGBUILDDIR>>/sage/src/doc/inventory/en/reference/repl
> [plot3d   ] building [inventory]: targets for 20 source files that are out of 
> date
> [plot3d   ] updating environment: [new config] 20 added, 0 changed, 0 removed
> [arithgrou] building [inventory]: targets for 12 source files that are out of 
> date
> [arithgrou] updating environment: [new config] 12 added, 0 changed, 0 removed
> [arithgrou] The inventory files are in doc/inventory/en/reference/arithgroup.
> Build finished. The built documents can be found in 
> /<<PKGBUILDDIR>>/sage/src/doc/inventory/en/reference/arithgroup
> [spkg     ] The inventory files are in doc/inventory/en/reference/spkg.
> Build finished. The built documents can be found in 
> /<<PKGBUILDDIR>>/sage/src/doc/inventory/en/reference/spkg
> /<<PKGBUILDDIR>>/sage/src/sage_docbuild/__init__.py:1022: DeprecationWarning: 
> the package sage.media is deprecated
> See http://trac.sagemath.org/12673 for details.
>   __import__(module_name)
> [graphs   ] building [inventory]: targets for 74 source files that are out of 
> date
> [graphs   ] updating environment: [new config] 74 added, 0 changed, 0 removed
> [dynamics ] The inventory files are in doc/inventory/en/reference/dynamics.
> Build finished. The built documents can be found in 
> /<<PKGBUILDDIR>>/sage/src/doc/inventory/en/reference/dynamics
> [misc     ] building [inventory]: targets for 132 source files that are out 
> of date
> [misc     ] updating environment: [new config] 132 added, 0 changed, 0 removed
> [parallel ] building [inventory]: targets for 8 source files that are out of 
> date
> [parallel ] updating environment: [new config] 8 added, 0 changed, 0 removed
> [parallel ] The inventory files are in doc/inventory/en/reference/parallel.
> Build finished. The built documents can be found in 
> /<<PKGBUILDDIR>>/sage/src/doc/inventory/en/reference/parallel
> [polynomia] The inventory files are in 
> doc/inventory/en/reference/polynomial_rings.
> Build finished. The built documents can be found in 
> /<<PKGBUILDDIR>>/sage/src/doc/inventory/en/reference/polynomial_rings
> /<<PKGBUILDDIR>>/sage/src/sage_docbuild/__init__.py:1022: FutureWarning: 
> EllipticCurveHom_composite is experimental code.
> See https://trac.sagemath.org/32744 for details.
>   __import__(module_name)
> [topology ] building [inventory]: targets for 14 source files that are out of 
> date
> [topology ] updating environment: [new config] 14 added, 0 changed, 0 removed
> [arithmeti] building [inventory]: targets for 59 source files that are out of 
> date
> [arithmeti] updating environment: [new config] 59 added, 0 changed, 0 removed
> Error building the documentation.
> Traceback (most recent call last):
>   File "/usr/lib/python3.10/runpy.py", line 196, in _run_module_as_main
>     return _run_code(code, main_globals, None,
>   File "/usr/lib/python3.10/runpy.py", line 86, in _run_code
>     exec(code, run_globals)
>   File "/<<PKGBUILDDIR>>/sage/src/sage_docbuild/__main__.py", line 2, in 
> <module>
>     main()
>   File "/<<PKGBUILDDIR>>/sage/src/sage_docbuild/__init__.py", line 1729, in 
> main
>     builder()
>   File "/<<PKGBUILDDIR>>/sage/src/sage_docbuild/__init__.py", line 348, in 
> _wrapper
>     getattr(get_builder(document), 'inventory')(*args, **kwds)
>   File "/<<PKGBUILDDIR>>/sage/src/sage_docbuild/__init__.py", line 537, in 
> _wrapper
>     self._build_everything_except_bibliography(format, *args, **kwds)
>   File "/<<PKGBUILDDIR>>/sage/src/sage_docbuild/__init__.py", line 521, in 
> _build_everything_except_bibliography
>     build_many(build_ref_doc, non_references)
>   File "/<<PKGBUILDDIR>>/sage/src/sage_docbuild/__init__.py", line 299, in 
> build_many
>     _build_many(target, args, processes=processes)
>   File "/<<PKGBUILDDIR>>/sage/src/sage_docbuild/utils.py", line 289, in 
> build_many
>     raise worker_exc.original_exception
> Exception: ('Non-exception during docbuild: Segmentation fault', 
> SignalError('Segmentation fault'))
> 
>     Note: incremental documentation builds sometimes cause spurious
>     error messages. To be certain that these are real errors, run
>     "make doc-clean doc-uninstall" first and try again.
> make[3]: *** [debian/rules:84: override_dh_auto_build-indep] Error 1


The full build log is available from:
http://qa-logs.debian.net/2022/10/23/sagemath_9.5-4_unstable.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20221023;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20221023&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.

--- End Message ---
--- Begin Message ---
Source: sagemath
Source-Version: 9.5-5
Done: Tobias Hansen <than...@debian.org>

We believe that the bug you reported is fixed in the latest version of
sagemath, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1022...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Tobias Hansen <than...@debian.org> (supplier of updated sagemath package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 07 Feb 2023 07:40:09 +0000
Source: sagemath
Architecture: source
Version: 9.5-5
Distribution: unstable
Urgency: high
Maintainer: Debian Math Team <team+m...@tracker.debian.org>
Changed-By: Tobias Hansen <than...@debian.org>
Closes: 1013399 1020576 1022254 1022278 1025217 1025874 1028345 1028433
Changes:
 sagemath (9.5-5) unstable; urgency=high
 .
   * Rebuild against current dependencies
     (Closes: #1013399, #1020576, #1022254, #1022278,
              #1025217, #1025874, #1028345, #1028433)
   * New (Build-)Depends:
     - libgiac-dev >= 1.9.0.19+dfsg2-2
     - gap-dev (>= 4.12)
     - libgiac-dev (>= 1.9.0.35+dfsg2-1.1)
   * New patches:
     - u0-version-pari-2.15.patch                 #34537
     - u0-version-sphinx-4.4.patch                #33272
     - u0-version-sphinx-5.2.patch                #34615
     - u0-version-gap-4.12.patch                  #34391
     - u0-version-python-3.11.patch               #33842
     - u0-version-matplotlib-3.6.patch
     - u0-version-sympy-1.10.patch
     - u0-version-scipy-1.8.patch
     - u0-version-singular-4.3.1-p3.patch         #34851
     - dt-ignore-deprecation-warnings.patch
   * Allow up to 200 failed doctests.
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sagemath_9.5-5.debian.tar.xz
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sagemath_9.5-5_source.buildinfo

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--- End Message ---

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