Source: khmer Version: 3.0.0~a3+dfsg-3 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs User: lu...@debian.org Usertags: ftbfs-20220917 ftbfs-bookworm
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 > -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. > -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time > -D_FORTIFY_SOURCE=2 > build/temp.linux-x86_64-cpython-310/khmer/_oxli/oxli_exception_convert.o > build/temp.linux-x86_64-cpython-310/khmer/_oxli/readaligner.o > build/temp.linux-x86_64-3.10/src/khmer/_cpy_khmer.o > build/temp.linux-x86_64-3.10/src/khmer/_cpy_utils.o > build/temp.linux-x86_64-3.10/src/khmer/_cpy_readparsers.o > build/temp.linux-x86_64-3.10/src/oxli/read_parsers.o > build/temp.linux-x86_64-3.10/src/oxli/kmer_hash.o > build/temp.linux-x86_64-3.10/src/oxli/hashtable.o > build/temp.linux-x86_64-3.10/src/oxli/hashgraph.o > build/temp.linux-x86_64-3.10/src/oxli/labelhash.o > build/temp.linux-x86_64-3.10/src/oxli/subset.o > build/temp.linux-x86_64-3.10/src/oxli/read_aligner.o > build/temp.linux-x86_64-3.10/src/oxli/hllcounter.o > build/temp.linux-x86_64-3.10/src/oxli/traversal.o > build/temp.linux-x86_64-3.10/src/oxli/kmer_filters.o > build/temp.linux-x86_64-3.10/src/oxli/assembler.o > build/temp.linux-x86_64-3.10/src/oxli/alphabets.o > build/temp.linux-x86_64-3.10/src/oxli/storage.o > build/temp.linux-x86_64-3.10/third-party/smhasher/MurmurHash3.o > third-party/cqf/gqf.o -L/usr/lib/x86_64-linux-gnu -lz -lbz2 -o > /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_khmer/build/khmer/_oxli/readaligner.cpython-310-x86_64-linux-gnu.so > -fopenmp > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/khmer/_cpy_khmer.o: > No such file or directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/khmer/_cpy_utils.o: > No such file or directory > /usr/bin/ld: cannot find > build/temp.linux-x86_64-3.10/src/khmer/_cpy_readparsers.o: No such file or > directory > /usr/bin/ld: cannot find > build/temp.linux-x86_64-3.10/src/oxli/read_parsers.o: No such file or > directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/kmer_hash.o: > No such file or directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/hashtable.o: > No such file or directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/hashgraph.o: > No such file or directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/labelhash.o: > No such file or directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/subset.o: No > such file or directory > /usr/bin/ld: cannot find > build/temp.linux-x86_64-3.10/src/oxli/read_aligner.o: No such file or > directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/hllcounter.o: > No such file or directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/traversal.o: > No such file or directory > /usr/bin/ld: cannot find > build/temp.linux-x86_64-3.10/src/oxli/kmer_filters.o: No such file or > directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/assembler.o: > No such file or directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/alphabets.o: > No such file or directory > /usr/bin/ld: cannot find build/temp.linux-x86_64-3.10/src/oxli/storage.o: No > such file or directory > /usr/bin/ld: cannot find > build/temp.linux-x86_64-3.10/third-party/smhasher/MurmurHash3.o: No such file > or directory > collect2: error: ld returned 1 exit status The full build log is available from: http://qa-logs.debian.net/2022/09/17/khmer_3.0.0~a3+dfsg-3_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20220917;users=lu...@debian.org or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20220917&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please marking it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
