Your message dated Fri, 12 Jun 2020 18:21:38 +0000
with message-id <e1jjoj8-000es4...@fasolo.debian.org>
and subject line Bug#954351: fixed in rdkit 201909.1-4.1
has caused the Debian Bug report #954351,
regarding FTBFS with Boost 1.71
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
954351: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=954351
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: rdkit
Version: 201909.1-2
Severity: wishlist
User: team+bo...@tracker.debian.org
Usertags: boost1.71
Dear Maintainer,
your package fails to build with boost1.71. You can find a build log
attached. If you want to attempt the build yourself, an updated version
of boost-defaults which brings in boost1.71 dependencies can be found
adding this line to your sources.list file:
deb https://people.debian.org/~gio/reprepro gio main
This bug has severity whishlist for the moment, but it will raised to RC
as soon as version 1.71 of Boost is promoted to default.
More specifically, your package fails building because some problem in
the CMake scripts. I don't really understand the problem, because the
log clearly states that Boost libraries are found, but then for some
reason they cannot be used. I am not really expert of CMake, so I am not
sure of how to debug this.
From the log:
> -- Found Boost:
> /usr/lib/x86_64-linux-gnu/cmake/Boost-1.71.0/BoostConfig.cmake (found
> suitable version "1.71.0", minimum required is "1.56.0") found components:
> serialization
> == Using strict rotor definition
> -- Found Boost:
> /usr/lib/x86_64-linux-gnu/cmake/Boost-1.71.0/BoostConfig.cmake (found
> suitable version "1.71.0", minimum required is "1.56.0") found components:
> system iostreams
> -- maeparser include dir set as '/usr/include'
> -- maeparser libraries set as '/usr/lib/x86_64-linux-gnu/libmaeparser.so'
> -- Found maeparser: /usr/include
> -- coordgen include dir set as /usr/include
> -- coordgen libraries set as '/usr/lib/x86_64-linux-gnu/libcoordgen.so'
> -- Found coordgen: /usr/include
> Downloading
> https://github.com/rareylab/RingDecomposerLib/archive/v1.1.3_rdkit.tar.gz...
> == Updating Filters.cpp from pains file
> == Done updating pains files
> -- Configuring done
> CMake Error at Code/cmake/Modules/RDKitUtils.cmake:153 (add_executable):
> Target "testCoordGen" links to target "Boost::system" but the target was
> not found. Perhaps a find_package() call is missing for an IMPORTED
> target, or an ALIAS target is missing?
> Call Stack (most recent call first):
> External/CoordGen/CMakeLists.txt:110 (rdkit_test)
Thanks and all the best, Giovanni.
--
Giovanni Mascellani <g.mascell...@gmail.com>
Postdoc researcher - Université Libre de Bruxelles
rdkit.log.gz
Description: application/gzip
signature.asc
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: rdkit
Source-Version: 201909.1-4.1
Done: Adrian Bunk <b...@debian.org>
We believe that the bug you reported is fixed in the latest version of
rdkit, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 954...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Adrian Bunk <b...@debian.org> (supplier of updated rdkit package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 10 Jun 2020 16:07:07 +0300
Source: rdkit
Architecture: source
Version: 201909.1-4.1
Distribution: unstable
Urgency: high
Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org>
Changed-By: Adrian Bunk <b...@debian.org>
Closes: 954351
Changes:
rdkit (201909.1-4.1) unstable; urgency=high
.
* Non-maintainer upload.
* Add patch for FTBFS with Boost 1.71. (Closes: #954351)
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