Your message dated Sat, 29 Jul 2017 14:07:55 +0300
with message-id <20170729110755.pkynxu6rruhxurow@localhost>
and subject line Fixed in 1.4.1-3
has caused the Debian Bug report #868958,
regarding bcftools FTBFS on 32bit: test failures
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
868958: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=868958
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: bcftools
Version: 1.4.1-2
Severity: serious
https://buildd.debian.org/status/package.php?p=bcftools&suite=sid
...
test_vcf_query:
/<<PKGBUILDDIR>>/bcftools view -Ob /tmp/f0hqBlggDJ/view.filter.vcf.gz |
/<<PKGBUILDDIR>>/bcftools query -f'%POS %CIGAR\n' -i'strlen(CIGAR[*])=4'
*** Error in `/<<PKGBUILDDIR>>/bcftools': free(): invalid next size (fast):
0x80abd7a0 ***
/bin/bash: line 1: 11930 Done /<<PKGBUILDDIR>>/bcftools view
-Ob /tmp/f0hqBlggDJ/view.filter.vcf.gz
11931 Aborted | /<<PKGBUILDDIR>>/bcftools query -f'%POS
%CIGAR\n' -i'strlen(CIGAR[*])=4'
Non-zero status 134
.. failed ...
...
test_vcf_norm:
/<<PKGBUILDDIR>>/bcftools norm --no-version -cx -f
/<<PKGBUILDDIR>>/test/norm.fa /tmp/f0hqBlggDJ/norm.vcf.gz 2>/dev/null
The outputs differ:
/<<PKGBUILDDIR>>/test/norm.out
/<<PKGBUILDDIR>>/test/norm.out.new
.. failed ...
test_vcf_norm:
/<<PKGBUILDDIR>>/bcftools norm -Ob -cx -f
/<<PKGBUILDDIR>>/test/norm.fa /tmp/f0hqBlggDJ/norm.vcf.gz 2>/dev/null |
/<<PKGBUILDDIR>>/bcftools view | grep -v ^##bcftools_
The outputs differ:
/<<PKGBUILDDIR>>/test/norm.out
/<<PKGBUILDDIR>>/test/norm.out.new
.. failed ...
...
Number of tests:
total .. 617
passed .. 614
failed .. 3
Makefile:121: recipe for target 'test' failed
make[1]: *** [test] Error 1
--- End Message ---
--- Begin Message ---
Version: 1.4.1-3
bcftools (1.4.1-3) unstable; urgency=medium
...
* Incorporate patches from Ubuntu to fix FTBFS on some 32-bit archs.
...
This has fixed the build on all little-endian 32bit architectures
except i386 (#819617):
https://buildd.debian.org/status/package.php?p=bcftools&suite=sid
cu
Adrian
--
"Is there not promise of rain?" Ling Tan asked suddenly out
of the darkness. There had been need of rain for many days.
"Only a promise," Lao Er said.
Pearl S. Buck - Dragon Seed
--- End Message ---
