Source: bcftools
Version: 1.4.1-2
Severity: serious
https://buildd.debian.org/status/package.php?p=bcftools&suite=sid
...
test_vcf_query:
/<<PKGBUILDDIR>>/bcftools view -Ob /tmp/f0hqBlggDJ/view.filter.vcf.gz |
/<<PKGBUILDDIR>>/bcftools query -f'%POS %CIGAR\n' -i'strlen(CIGAR[*])=4'
*** Error in `/<<PKGBUILDDIR>>/bcftools': free(): invalid next size (fast):
0x80abd7a0 ***
/bin/bash: line 1: 11930 Done /<<PKGBUILDDIR>>/bcftools view
-Ob /tmp/f0hqBlggDJ/view.filter.vcf.gz
11931 Aborted | /<<PKGBUILDDIR>>/bcftools query -f'%POS
%CIGAR\n' -i'strlen(CIGAR[*])=4'
Non-zero status 134
.. failed ...
...
test_vcf_norm:
/<<PKGBUILDDIR>>/bcftools norm --no-version -cx -f
/<<PKGBUILDDIR>>/test/norm.fa /tmp/f0hqBlggDJ/norm.vcf.gz 2>/dev/null
The outputs differ:
/<<PKGBUILDDIR>>/test/norm.out
/<<PKGBUILDDIR>>/test/norm.out.new
.. failed ...
test_vcf_norm:
/<<PKGBUILDDIR>>/bcftools norm -Ob -cx -f
/<<PKGBUILDDIR>>/test/norm.fa /tmp/f0hqBlggDJ/norm.vcf.gz 2>/dev/null |
/<<PKGBUILDDIR>>/bcftools view | grep -v ^##bcftools_
The outputs differ:
/<<PKGBUILDDIR>>/test/norm.out
/<<PKGBUILDDIR>>/test/norm.out.new
.. failed ...
...
Number of tests:
total .. 617
passed .. 614
failed .. 3
Makefile:121: recipe for target 'test' failed
make[1]: *** [test] Error 1
