Your message dated Wed, 05 Apr 2017 15:04:26 +0000 with message-id <e1cvmty-00032a...@fasolo.debian.org> and subject line Bug#859107: fixed in jmodeltest 2.1.10+dfsg-5 has caused the Debian Bug report #859107, regarding libbrowserlauncher-java dependency is going to be removed from Stretch to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 859107: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=859107 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: jmodeltest Version: 2.1.10+dfsg-3 Severity: serious Control: tags -1 patch As pointed out in https://bugs.debian.org/859001 https://bugs.debian.org/859004 https://bugs.debian.org/859005 I recommend to remove libbrowserlauncher from Stretch because it is not working at all. To prevent jmodeltest from being removed, here is a patch that replaces the package by a freedesktop.org compatible miniversion. Cheers Olediff -Nru jmodeltest-2.1.10+dfsg/debian/changelog jmodeltest-2.1.10+dfsg/debian/changelog --- jmodeltest-2.1.10+dfsg/debian/changelog 2016-08-17 15:43:53.000000000 +0200 +++ jmodeltest-2.1.10+dfsg/debian/changelog 2017-03-30 14:03:42.000000000 +0200 @@ -1,3 +1,10 @@ +jmodeltest (2.1.10+dfsg-3.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Use custom BrowserLauncher. Fixes: #-1 + + -- Ole Streicher <oleb...@debian.org> Thu, 30 Mar 2017 14:03:42 +0200 + jmodeltest (2.1.10+dfsg-3) unstable; urgency=medium * Add missing command line arguments to wrapper diff -Nru jmodeltest-2.1.10+dfsg/debian/control jmodeltest-2.1.10+dfsg/debian/control --- jmodeltest-2.1.10+dfsg/debian/control 2016-08-17 15:43:53.000000000 +0200 +++ jmodeltest-2.1.10+dfsg/debian/control 2017-03-30 13:53:46.000000000 +0200 @@ -13,7 +13,6 @@ libjfreechart-java, libmpj-java, libpal-java, - libbrowserlauncher-java, prottest, texlive-latex-base, texlive-fonts-recommended, diff -Nru jmodeltest-2.1.10+dfsg/debian/copyright jmodeltest-2.1.10+dfsg/debian/copyright --- jmodeltest-2.1.10+dfsg/debian/copyright 2016-08-17 15:43:53.000000000 +0200 +++ jmodeltest-2.1.10+dfsg/debian/copyright 2017-03-30 14:03:26.000000000 +0200 @@ -26,7 +26,8 @@ License: GPL-3+ Files: debian/* -Copyright: 2015 Andreas Tille <ti...@debian.org> +Copyright: 2015 Andreas Tille <ti...@debian.org>, + 2017 Ole Streicher <oleb...@debian.org> License: GPL-2+ License: GPL-2+ diff -Nru jmodeltest-2.1.10+dfsg/debian/patches/series jmodeltest-2.1.10+dfsg/debian/patches/series --- jmodeltest-2.1.10+dfsg/debian/patches/series 2016-08-17 15:43:53.000000000 +0200 +++ jmodeltest-2.1.10+dfsg/debian/patches/series 2017-03-30 13:56:17.000000000 +0200 @@ -2,3 +2,4 @@ do_not_chmod_anything_in_usr_bin.patch adapt_config.patch replace_natbib_bst_by_plainnat.patch +use_custom_BrowserLauncher.patch diff -Nru jmodeltest-2.1.10+dfsg/debian/patches/use_custom_BrowserLauncher.patch jmodeltest-2.1.10+dfsg/debian/patches/use_custom_BrowserLauncher.patch --- jmodeltest-2.1.10+dfsg/debian/patches/use_custom_BrowserLauncher.patch 1970-01-01 01:00:00.000000000 +0100 +++ jmodeltest-2.1.10+dfsg/debian/patches/use_custom_BrowserLauncher.patch 2017-03-30 14:02:06.000000000 +0200 @@ -0,0 +1,23 @@ +Author: Ole Streicher <oleb...@debian.org> +Last-Update: Thu, 30 Mar 2017 13:58:11 +0200 +Description: Use custom BrowserLauncher + +--- /dev/null ++++ b/src/main/java/edu/stanfort/ejalbert/BrowserLauncher.java +@@ -0,0 +1,16 @@ ++package edu.stanford.ejalbert; ++import java.io.IOException; ++ ++/* ++ * Simple replacement for the BrowserLauncher, which is compatible to the ++ * Free Desktop Consortium. Written by Ole Streicher <oleb...@debian.org> ++ * License here: GPL-2+, to match with the other Debian files ++ */ ++public class BrowserLauncher { ++ public void openURLinBrowser(String url) { ++ try { ++ Runtime.getRuntime().exec(new String[] { "xdg-open", url } ); ++ } catch (IOException e) { ++ } ++ } ++}
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--- Begin Message ---Source: jmodeltest Source-Version: 2.1.10+dfsg-5 We believe that the bug you reported is fixed in the latest version of jmodeltest, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 859...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated jmodeltest package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 05 Apr 2017 16:29:50 +0200 Source: jmodeltest Binary: jmodeltest Architecture: source all Version: 2.1.10+dfsg-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: jmodeltest - HPC selection of models of nucleotide substitution Closes: 859107 Changes: jmodeltest (2.1.10+dfsg-5) unstable; urgency=medium . * Remove BrowserLauncher also from Build-Depends Closes: #859107 Checksums-Sha1: f05c35ff9517d3340966de18fca794f8baa0b8a6 2246 jmodeltest_2.1.10+dfsg-5.dsc 3dacf4497a535b7303a56e3640c3018f0b3ff343 7272 jmodeltest_2.1.10+dfsg-5.debian.tar.xz 8a4299607c82134e7322226eb1f00f9977ad0980 980530 jmodeltest_2.1.10+dfsg-5_all.deb b4be74428bbbda857556484ecccd11e23b386def 12254 jmodeltest_2.1.10+dfsg-5_amd64.buildinfo Checksums-Sha256: 083e48be428de8253b08c7f40bcce083a15245ab91f80c28895506969bc2d920 2246 jmodeltest_2.1.10+dfsg-5.dsc a8ca597424c0ef5cb2021b8dbce408d3a639d844f516700338098d41ca6fab7a 7272 jmodeltest_2.1.10+dfsg-5.debian.tar.xz e1cccaa04c455dd3cb75eff3c3520f1e6597404a93f42787f8d748a6d3e2aa54 980530 jmodeltest_2.1.10+dfsg-5_all.deb 6f73dbb7bbdef0a2e843243d8190d4d5031136023d62dfed44edb507f172f375 12254 jmodeltest_2.1.10+dfsg-5_amd64.buildinfo Files: ee292e815166ae1a9b0140a8f0c3fe73 2246 science optional jmodeltest_2.1.10+dfsg-5.dsc 770fc920b98a8d7e5c96453204e288da 7272 science optional jmodeltest_2.1.10+dfsg-5.debian.tar.xz a4072d0fcb8dfa351115c1cd455c6bef 980530 science optional jmodeltest_2.1.10+dfsg-5_all.deb 3020252def244fb6c1e1d973399802f9 12254 science optional jmodeltest_2.1.10+dfsg-5_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAljlALMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFEnQ/+K2ugIX24kx/cUq2T+6K6h0gy/vhwKY/R ucVhlHxvOHzVKkY9nHt53lSHD3R+jgeQgWBqn50XINbm9rtajVMTYy2B2rEAqVgL VM/w50pYNmTAnZHOjM02pkVVeROd8ZAIdzoqQ50X3tPJSBP38+IXBWi9747MjgmO 3ih2rt3LHx4sCVuSeXqMJ647qDUA+35TEb2ob5tiMm8E8u2H0MW9oQfxKjLrL6tB O/9q+M81R7CNZKZ/QG8MAGHxbP3Kul5ojvjB5goSYXGf5dY/53VLCvt2YoIiG54R Wacl1vZJ3LFZTc2UBhAPDVoFn5phHnp/aUVBzKhvfTBeSP7U8HO1BYBMm/7WQRp0 ot49WRpNS4i8cfiwpC54uPSQTdJmj2yEc4Xb+DI9S37BjhgfJHWs12Szxe3dtifG 9Wb9hBZ9ELk7N2UBCEWcU/zOj8ZXbuMzlgyHxibDUHdqHGCDr6xegUJ6xncntS1m +gRw/+y2K5v7exEbrw6oPj/UdHtrho3w2p+UBlbWI5+fKBVYgQV+oHErU7S/NSmn R4DvN0tEJXOVm/lcwh2K53z9oS7pqLSZQ6H5BhDdkxiG4FImpP3S5dD+B0RsccYH MNik0fJgRVCDuTMjHMNETBf7p2R3sb4vxKmAqGZeAXFoCRnYNKPV4vXtg2bLGehU IEOMpBiprgg= =36/4 -----END PGP SIGNATURE-----
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