On 10/09/16 at 10:33 +0200, Andreas Tille wrote: > Hi Lucas, > > before you keep on filing bug reports against lots of R packages are you sure > that your build environment is correct. r-cran-knitr is available as far as > I can see.
Available, yes. Installable, no: It seems that r-cran-yaml needs updating. (unstable-amd64-sbuild)root@ip-172-31-10-194:~# apt-get build-dep r-bioc-deseq2 Reading package lists... Done Reading package lists... Done Building dependency tree Reading state information... Done Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: builddeps:r-bioc-deseq2 : Depends: r-cran-knitr but it is not going to be installed E: Unable to correct problems, you have held broken packages. (unstable-amd64-sbuild)root@ip-172-31-10-194:~# apt-get install r-cran-knitr Reading package lists... Done Building dependency tree Reading state information... Done Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: r-cran-knitr : Depends: r-cran-yaml but it is not going to be installed E: Unable to correct problems, you have held broken packages. (unstable-amd64-sbuild)root@ip-172-31-10-194:~# apt-get install r-cran-knitr r-cran-yaml Reading package lists... Done Building dependency tree Reading state information... Done Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: r-cran-yaml : Depends: libyaml-0-2 (= 0.1.6-3) but it is not going to be installed E: Unable to correct problems, you have held broken packages. (unstable-amd64-sbuild)root@ip-172-31-10-194:~# apt-get install r-cran-knitr r-cran-yaml libyaml-0-2 Reading package lists... Done Building dependency tree Reading state information... Done Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: r-cran-yaml : Depends: libyaml-0-2 (= 0.1.6-3) but 0.1.7-1 is to be installed E: Unable to correct problems, you have held broken packages.
