On September 3, 2016 4:01:16 PM EDT, Santiago Vila <sanv...@debian.org> wrote:
>Package: src:nipy
>Version: 0.4.0+git26-gf8d3149-1
>Severity: serious
>
>Dear maintainer:
>
>I tried to build this package in stretch with "dpkg-buildpackage -A"
>(which is what the "Arch: all" autobuilder would do to build it)
>but it failed:
>
>--------------------------------------------------------------------------------
>[...]
> debian/rules build-indep
>dh --buildsystem=python_distutils --with=python2 build-indep
> dh_testdir -i -O--buildsystem=python_distutils
> dh_update_autotools_config -i -O--buildsystem=python_distutils
> dh_auto_configure -i -O--buildsystem=python_distutils
> debian/rules override_dh_auto_build
>make[1]: Entering directory '/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149'
>dh_auto_build
>pyversions: missing X(S)-Python-Version in control file, fall back to
>debian/pyversions
> python-dbg setup.py build --force
>lapack_opt_info:
>openblas_lapack_info:
>libraries openblas not found in ['/usr/local/lib', '/usr/lib',
>'/usr/lib/x86_64-linux-gnu']
>
>[... snipped ...]
>
>../<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/labs/viz_tools/slicers.py:376:
>UserWarning: empty mask
> get_mask_bounds(not_mask, affine)
>.................S../<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/labs/mask.py:235:
>VisibleDeprecationWarning: using a non-integer number instead of an
>integer will result in an error in the future
> delta = sorted_input[limiteinf + 1:limitesup + 1] \
>/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/labs/mask.py:236:
>VisibleDeprecationWarning: using a non-integer number instead of an
>integer will result in an error in the future
> - sorted_input[limiteinf:limitesup]
>/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/labs/mask.py:238:
>VisibleDeprecationWarning: using a non-integer number instead of an
>integer will result in an error in the future
> threshold = 0.5 * (sorted_input[ia + limiteinf]
>/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/labs/mask.py:239:
>VisibleDeprecationWarning: using a non-integer number instead of an
>integer will result in an error in the future
> + sorted_input[ia + limiteinf + 1])
>................/usr/lib/python2.7/dist-packages/numpy/lib/function_base.py:2569:
>RuntimeWarning: invalid value encountered in true_divide
> c /= stddev[:, None]
>/usr/lib/python2.7/dist-packages/numpy/lib/function_base.py:2570:
>RuntimeWarning: invalid value encountered in true_divide
> c /= stddev[None, :]
>......................................................../<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/modalities/fmri/tests/test_dmtx.py:407:
>FutureWarning: elementwise comparison failed; returning scalar instead,
>but in the future will perform elementwise comparison
> idx = paradigm.onset[paradigm.con_id == 0].astype(np.int)
>/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/modalities/fmri/tests/test_dmtx.py:407:
>VisibleDeprecationWarning: using a boolean instead of an integer will
>result in an error in the future
> idx = paradigm.onset[paradigm.con_id == 0].astype(np.int)
>../<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/modalities/fmri/tests/test_dmtx.py:429:
>FutureWarning: elementwise comparison failed; returning scalar instead,
>but in the future will perform elementwise comparison
> idx = bp.onset[bp.con_id == 1].astype(np.int)
>/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/modalities/fmri/tests/test_dmtx.py:429:
>VisibleDeprecationWarning: using a boolean instead of an integer will
>result in an error in the future
> idx = bp.onset[bp.con_id == 1].astype(np.int)
>............/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/modalities/fmri/glm.py:581:
>UserWarning: Contrast for session 1 is null
> warn('Contrast for session %d is null' % i)
>....................S.............................../<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/modalities/fmri/tests/test_utils.py:212:
>VisibleDeprecationWarning: using a non-integer number instead of an
>integer will result in an error in the future
> z1s = np.zeros((np.round(1./dt)))
>......................................
>======================================================================
>ERROR: nipy.io.tests.test_image_io.test_badfile
>----------------------------------------------------------------------
>Traceback (most recent call last):
>File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in
>runTest
> self.test(*self.arg)
>File
>"/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/io/tests/test_image_io.py",
>line 44, in test_badfile
> assert_raises(ImageFileError, load_image, filename)
>File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line
>1145, in assert_raises
> return nose.tools.assert_raises(*args,**kwargs)
> File "/usr/lib/python2.7/unittest/case.py", line 473, in assertRaises
> callableObj(*args, **kwargs)
>File
>"/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149/debian/tmp/usr/lib/python2.7/dist-packages/nipy/io/files.py",
>line 57, in load
> img = nib.load(filename)
>File "/usr/lib/python2.7/dist-packages/nibabel/loadsave.py", line 40,
>in load
> raise FileNotFoundError("No such file: '%s'" % filename)
>FileNotFoundError: No such file: 'bad_file.foo'
>
>----------------------------------------------------------------------
>Ran 4535 tests in 252.382s
>
>FAILED (SKIP=5, errors=1)
>debian/rules:57: recipe for target 'test' failed
>make[1]: *** [test] Error 1
>make[1]: Leaving directory '/<<BUILDDIR>>/nipy-0.4.0+git26-gf8d3149'
>debian/rules:19: recipe for target 'binary-indep' failed
>make: *** [binary-indep] Error 2
>dpkg-buildpackage: error: fakeroot debian/rules binary-indep gave error
>exit status 2
>--------------------------------------------------------------------------------
>
>It also fails in the reproducible builds autobuilders, so it's not a
>random thing.
>
>Thanks.
Thanks. Will have it fixed
--
Sent from a phone which beats iPhone.
