On Mon, Feb 22, 2016 at 03:25:11PM +0100, Kerstin Hoef-Emden wrote:
>
> Hi to all,
>
> at what time intervals syncing takes place?
12h if you are lucky - 24h is safe.
> I just tried pregap for the fix
> of the missing links and it did not yet work.
Hmmm, lets hunt down this as well. Could you please write the output of
apt-get policy staden
cat `which pregap4`
Perhaps you try
cp `which pregap4` ~/pregap4
edit ~/pregap4 and add
set -x
as the second line in this script. For me this looks pretty sensible.
Alternatively you could try explicitly calling
/usr/lib/staden/bin/pregap4
What happens if you do this?
> I tested uncommenting the line in the tcl-script of the contig editor with a
> version downloaded from sourceforge and installed with stow and the fix
> worked (I use xfce4).
Sounds promising
Andreas.
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