Package: debichem-abinitio Version: 0.0.3 Severity: serious User: debian...@lists.debian.org Usertags: instest-20141114 instest
Hi, While testing the installation of all packages in jessie, I ran into the following problem: > -- Now testing upgrade from wheezy-instest. > -- Finding version in wheezy-instest: debichem-abinitio 0.0.3 > -- Installing debichem-abinitio in wheezy-instest: OK > Reading package lists... > Building dependency tree... > Reading state information... > Starting > Starting 2 > Done > The following extra packages will be installed: > abinit aces3 adduser blcr-util cp2k cp2k-data debichem-tasks dmidecode > laptop-detect libblacs-mpi1 libblas3 libblas3gf libcr0 libfftw3-3 > libgfortran3 libgomp1 libibverbs1 libint1 liblapack3 liblapack3gf > liblocale-gettext-perl libnuma1 libopenmpi1.3 libquadmath0 libsc-data libsc7 > libscalapack-mpi1 libtorque2 mpi-default-bin mpqc nwchem nwchem-data > openmpi-bin openmpi-checkpoint openmpi-common openmx psi3 quantum-espresso > quantum-espresso-data tasksel tasksel-data > Suggested packages: > abinit-doc perl-modules blcr-dkms libfftw3-bin libfftw3-dev scalapack-doc > mpqc-support gfortran > The following NEW packages will be installed: > abinit aces3 adduser blcr-util cp2k cp2k-data debichem-abinitio > debichem-tasks dmidecode laptop-detect libblacs-mpi1 libblas3 libblas3gf > libcr0 libfftw3-3 libgfortran3 libgomp1 libibverbs1 libint1 liblapack3 > liblapack3gf liblocale-gettext-perl libnuma1 libopenmpi1.3 libquadmath0 > libsc-data libsc7 libscalapack-mpi1 libtorque2 mpi-default-bin mpqc nwchem > nwchem-data openmpi-bin openmpi-checkpoint openmpi-common openmx psi3 > quantum-espresso quantum-espresso-data tasksel tasksel-data > 0 upgraded, 42 newly installed, 0 to remove and 0 not upgraded. > Need to get 136 MB of archives. > After this operation, 598 MB of additional disk space will be used. > Get:1 http://localhost/debian/ wheezy/main liblocale-gettext-perl amd64 > 1.05-7+b1 [20.4 kB] > Get:2 http://localhost/debian/ wheezy/main tasksel-data all 3.14.1 [20.6 kB] > Get:3 http://localhost/debian/ wheezy/main tasksel all 3.14.1 [94.8 kB] > Get:4 http://localhost/debian/ wheezy/main libgomp1 amd64 4.7.2-5 [27.5 kB] > Get:5 http://localhost/debian/ wheezy/main libfftw3-3 amd64 3.3.2-3.1 [1665 > kB] > Get:6 http://localhost/debian/ wheezy/main libquadmath0 amd64 4.7.2-5 [125 kB] > Get:7 http://localhost/debian/ wheezy/main libgfortran3 amd64 4.7.2-5 [351 kB] > Get:8 http://localhost/debian/ wheezy/main adduser all 3.113+nmu3 [264 kB] > Get:9 http://localhost/debian/ wheezy/main dmidecode amd64 2.11-9 [77.1 kB] > Get:10 http://localhost/debian/ wheezy/main libblas3 amd64 1.2.20110419-5 > [293 kB] > Get:11 http://localhost/debian/ wheezy/main liblapack3 amd64 > 3.4.1+dfsg-1+deb70u1 [5036 kB] > Get:12 http://localhost/debian/ wheezy/main libibverbs1 amd64 1.1.6-1 [35.3 > kB] > Get:13 http://localhost/debian/ wheezy/main libnuma1 amd64 2.0.8~rc4-1 [33.7 > kB] > Get:14 http://localhost/debian/ wheezy/main libtorque2 amd64 > 2.4.16+dfsg-1+deb7u3 [121 kB] > Get:15 http://localhost/debian/ wheezy/main libopenmpi1.3 amd64 1.4.5-1 [1436 > kB] > Get:16 http://localhost/debian/ wheezy/main aces3 amd64 3.0.6-7 [12.6 MB] > Get:17 http://localhost/debian/ wheezy/main libcr0 amd64 0.8.5-2 [36.9 kB] > Get:18 http://localhost/debian/ wheezy/main blcr-util amd64 0.8.5-2 [43.7 kB] > Get:19 http://localhost/debian/ wheezy/main openmpi-common all 1.4.5-1 [101 > kB] > Get:20 http://localhost/debian/ wheezy/main openmpi-bin amd64 1.4.5-1 [166 kB] > Get:21 http://localhost/debian/ wheezy/main mpi-default-bin amd64 1.0.1 [2990 > B] > Get:22 http://localhost/debian/ wheezy/main libblacs-mpi1 amd64 1.1-31 [68.4 > kB] > Get:23 http://localhost/debian/ wheezy/main libint1 amd64 1.1.4-1 [971 kB] > Get:24 http://localhost/debian/ wheezy/main libblas3gf all 1.2.20110419-5 > [8090 B] > Get:25 http://localhost/debian/ wheezy/main liblapack3gf all > 3.4.1+dfsg-1+deb70u1 [10.5 kB] > Get:26 http://localhost/debian/ wheezy/main libscalapack-mpi1 amd64 1.8.0-9 > [3201 kB] > Get:27 http://localhost/debian/ wheezy/main cp2k-data all 2.2.426-8 [9358 kB] > Get:28 http://localhost/debian/ wheezy/main cp2k amd64 2.2.426-8 [12.5 MB] > Get:29 http://localhost/debian/ wheezy/main laptop-detect amd64 0.13.7 [5224 > B] > Get:30 http://localhost/debian/ wheezy/main libsc-data all 2.3.1-14 [313 kB] > Get:31 http://localhost/debian/ wheezy/main libsc7 amd64 2.3.1-14 [3243 kB] > Get:32 http://localhost/debian/ wheezy/main mpqc amd64 2.3.1-14 [124 kB] > Get:33 http://localhost/debian/ wheezy/main nwchem-data all 6.1-6 [9326 kB] > Get:34 http://localhost/debian/ wheezy/main nwchem amd64 6.1-6 [14.1 MB] > Get:35 http://localhost/debian/ wheezy/main psi3 amd64 3.4.0-4 [6806 kB] > Get:36 http://localhost/debian/ wheezy/main quantum-espresso amd64 5.0-1 > [41.1 MB] > Get:37 http://localhost/debian/ wheezy/main quantum-espresso-data all 5.0-1 > [6392 kB] > Get:38 http://localhost/debian/ wheezy/main abinit amd64 5.3.4.dfsg-3 [5009 > kB] > Get:39 http://localhost/debian/ wheezy/main debichem-tasks all 0.0.3 [3296 B] > Get:40 http://localhost/debian/ wheezy/main debichem-abinitio all 0.0.3 [4758 > B] > Get:41 http://localhost/debian/ wheezy/main openmpi-checkpoint amd64 1.4.5-1 > [96.8 kB] > Get:42 http://localhost/debian/ wheezy/main openmx amd64 3.5-1 [1031 kB] > Extracting templates from packages: 71% Extracting templates from packages: 100% > Preconfiguring packages ... > Fetched 136 MB in 6s (22.2 MB/s) > Selecting previously unselected package liblocale-gettext-perl. > (Reading database ... 6634 files and directories currently installed.) > Unpacking liblocale-gettext-perl (from > .../liblocale-gettext-perl_1.05-7+b1_amd64.deb) ... > Selecting previously unselected package tasksel-data. > Unpacking tasksel-data (from .../tasksel-data_3.14.1_all.deb) ... > Selecting previously unselected package tasksel. > Unpacking tasksel (from .../tasksel_3.14.1_all.deb) ... > Selecting previously unselected package libgomp1:amd64. > Unpacking libgomp1:amd64 (from .../libgomp1_4.7.2-5_amd64.deb) ... > Selecting previously unselected package libfftw3-3:amd64. > Unpacking libfftw3-3:amd64 (from .../libfftw3-3_3.3.2-3.1_amd64.deb) ... > Selecting previously unselected package libquadmath0:amd64. > Unpacking libquadmath0:amd64 (from .../libquadmath0_4.7.2-5_amd64.deb) ... > Selecting previously unselected package libgfortran3:amd64. > Unpacking libgfortran3:amd64 (from .../libgfortran3_4.7.2-5_amd64.deb) ... > Selecting previously unselected package adduser. > Unpacking adduser (from .../adduser_3.113+nmu3_all.deb) ... > Selecting previously unselected package dmidecode. > Unpacking dmidecode (from .../dmidecode_2.11-9_amd64.deb) ... > Selecting previously unselected package libblas3. > Unpacking libblas3 (from .../libblas3_1.2.20110419-5_amd64.deb) ... > Selecting previously unselected package liblapack3. > Unpacking liblapack3 (from .../liblapack3_3.4.1+dfsg-1+deb70u1_amd64.deb) ... > Selecting previously unselected package libibverbs1. > Unpacking libibverbs1 (from .../libibverbs1_1.1.6-1_amd64.deb) ... > Selecting previously unselected package libnuma1. > Unpacking libnuma1 (from .../libnuma1_2.0.8~rc4-1_amd64.deb) ... > Selecting previously unselected package libtorque2. > Unpacking libtorque2 (from .../libtorque2_2.4.16+dfsg-1+deb7u3_amd64.deb) ... > Selecting previously unselected package libopenmpi1.3. > Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.5-1_amd64.deb) ... > Selecting previously unselected package aces3. > Unpacking aces3 (from .../aces3_3.0.6-7_amd64.deb) ... > Selecting previously unselected package libcr0. > Unpacking libcr0 (from .../libcr0_0.8.5-2_amd64.deb) ... > Selecting previously unselected package blcr-util. > Unpacking blcr-util (from .../blcr-util_0.8.5-2_amd64.deb) ... > Selecting previously unselected package openmpi-common. > Unpacking openmpi-common (from .../openmpi-common_1.4.5-1_all.deb) ... > Selecting previously unselected package openmpi-bin. > Unpacking openmpi-bin (from .../openmpi-bin_1.4.5-1_amd64.deb) ... > Selecting previously unselected package mpi-default-bin. > Unpacking mpi-default-bin (from .../mpi-default-bin_1.0.1_amd64.deb) ... > Selecting previously unselected package libblacs-mpi1. > Unpacking libblacs-mpi1 (from .../libblacs-mpi1_1.1-31_amd64.deb) ... > Selecting previously unselected package libint1. > Unpacking libint1 (from .../libint1_1.1.4-1_amd64.deb) ... > Selecting previously unselected package libblas3gf. > Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-5_all.deb) ... > Selecting previously unselected package liblapack3gf. > Unpacking liblapack3gf (from .../liblapack3gf_3.4.1+dfsg-1+deb70u1_all.deb) > ... > Selecting previously unselected package libscalapack-mpi1. > Unpacking libscalapack-mpi1 (from .../libscalapack-mpi1_1.8.0-9_amd64.deb) ... > Selecting previously unselected package cp2k-data. > Unpacking cp2k-data (from .../cp2k-data_2.2.426-8_all.deb) ... > Selecting previously unselected package cp2k. > Unpacking cp2k (from .../cp2k_2.2.426-8_amd64.deb) ... > Selecting previously unselected package laptop-detect. > Unpacking laptop-detect (from .../laptop-detect_0.13.7_amd64.deb) ... > Selecting previously unselected package libsc-data. > Unpacking libsc-data (from .../libsc-data_2.3.1-14_all.deb) ... > Selecting previously unselected package libsc7. > Unpacking libsc7 (from .../libsc7_2.3.1-14_amd64.deb) ... > Selecting previously unselected package mpqc. > Unpacking mpqc (from .../mpqc_2.3.1-14_amd64.deb) ... > Selecting previously unselected package nwchem-data. > Unpacking nwchem-data (from .../nwchem-data_6.1-6_all.deb) ... > Selecting previously unselected package nwchem. > Unpacking nwchem (from .../nwchem_6.1-6_amd64.deb) ... > Selecting previously unselected package psi3. > Unpacking psi3 (from .../psi3_3.4.0-4_amd64.deb) ... > Selecting previously unselected package quantum-espresso. > Unpacking quantum-espresso (from .../quantum-espresso_5.0-1_amd64.deb) ... > Selecting previously unselected package quantum-espresso-data. > Unpacking quantum-espresso-data (from > .../quantum-espresso-data_5.0-1_all.deb) ... > Selecting previously unselected package abinit. > Unpacking abinit (from .../abinit_5.3.4.dfsg-3_amd64.deb) ... > Selecting previously unselected package debichem-tasks. > Unpacking debichem-tasks (from .../debichem-tasks_0.0.3_all.deb) ... > Selecting previously unselected package debichem-abinitio. > Unpacking debichem-abinitio (from .../debichem-abinitio_0.0.3_all.deb) ... > Selecting previously unselected package openmpi-checkpoint. > Unpacking openmpi-checkpoint (from .../openmpi-checkpoint_1.4.5-1_amd64.deb) > ... > Selecting previously unselected package openmx. > Unpacking openmx (from .../openmx_3.5-1_amd64.deb) ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/adduser.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/apt.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/base-files.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/base-passwd.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/bash.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/bsdutils.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dash.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debconf.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/debian-archive-keyring.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debianutils.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debichem-abinitio.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dpkg.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/e2fslibs:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/findutils.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/gnupg.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/initscripts.postinst > Dpkg hook: enabling sh trace for 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/var/lib/dpkg/info/libncurses5:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libncursesw5:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libnuma1.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libopenmpi1.3.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libpam-modules:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libpam-runtime.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libpam0g:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libquadmath0:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libreadline6:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libsc7.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libscalapack-mpi1.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libselinux1:amd64.postinst > Dpkg hook: enabling sh trace for > 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enabling sh trace for /var/lib/dpkg/info/apt.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/bash.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dash.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debfoster.postrm > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/debian-archive-keyring.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debianutils.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debichem-abinitio.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dpkg.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/e2fslibs:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/initscripts.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/less.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libacl1:amd64.postrm > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libapt-inst1.5:amd64.postrm > Dpkg hook: enabling sh trace for > 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/var/lib/dpkg/info/libquadmath0:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libreadline6:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libsc7.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libscalapack-mpi1.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libselinux1:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libsemanage1:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libsepol1:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libslang2:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libss2:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libstdc++6:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libtinfo5:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libtorque2.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libusb-0.1-4:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libustr-1.0-1:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libuuid1:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/nvi.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/readline-common.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/sensible-utils.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/sysv-rc.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tar.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tasksel.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tzdata.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/util-linux.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/zlib1g:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/apt.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dash.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debconf.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debichem-abinitio.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dpkg.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/e2fsprogs.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/findutils.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/gnupg.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/initscripts.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libblas3.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libc6:amd64.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/liblapack3.preinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libpam-modules:amd64.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/login.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/mount.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/passwd.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/sysv-rc.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/util-linux.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/bash.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/bsdutils.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dash.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debconf.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debichem-abinitio.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dpkg.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/less.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libblas3.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libblas3gf.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libc6:amd64.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/liblapack3.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/liblapack3gf.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libpam-runtime.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/mawk.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/mount.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/nvi.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/openmpi-bin.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/sysv-rc.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tar.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/util-linux.prerm > Setting up liblocale-gettext-perl (1.05-7+b1) ... > Setting up libgomp1:amd64 (4.7.2-5) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up libfftw3-3:amd64 (3.3.2-3.1) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up libquadmath0:amd64 (4.7.2-5) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up libgfortran3:amd64 (4.7.2-5) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up adduser (3.113+nmu3) ... > + set -e > + [ ! -e /etc/adduser.conf ] > + cp /usr/share/adduser/adduser.conf /etc/adduser.conf > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/adduser.postinst > configure > + set -e > + [ ! -e /etc/adduser.conf ] > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + db_get adduser/homedir-changed > + _db_cmd GET adduser/homedir-changed > + _db_internal_IFS= > > + IFS= > + printf %s\n GET adduser/homedir-changed > + IFS= > > + IFS= > read -r _db_internal_line > + RET=10 adduser/homedir-changed doesn't exist > + return 10 > + RET=false > + [ false != true ] > + db_get adduser/homedir-permission > + _db_cmd GET adduser/homedir-permission > + _db_internal_IFS= > > + IFS= > + printf %s\n GET adduser/homedir-permission > + IFS= > > + IFS= > read -r _db_internal_line > + RET=true > + return 0 > + [ true = false ] > + NEW_PERMISSION=0755 > + grep -q ^DIR_MODE= /etc/adduser.conf > + cat /etc/adduser.conf > + sed -ne s/^DIR_MODE=\([0-9]*\).*$/\1/p > + OLD_PERMISSION=0755 > + [ 0755 != 0755 ] > Setting up dmidecode (2.11-9) ... > Setting up libblas3 (1.2.20110419-5) ... > + set -e > + update-alternatives --install /usr/lib/libblas.so.3 libblas.so.3 > /usr/lib/libblas/libblas.so.3 10 --slave /usr/lib/libblas.so.3gf > libblas.so.3gf /usr/lib/libblas/libblas.so.3 > update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide > /usr/lib/libblas.so.3 (libblas.so.3) in auto mode > + exit 0 > Setting up liblapack3 (3.4.1+dfsg-1+deb70u1) ... > + set -e > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/liblapack3.postinst > configure > + set -e > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + update-alternatives --install /usr/lib/liblapack.so.3 liblapack.so.3 > /usr/lib/lapack/liblapack.so.3 10 --slave /usr/lib/liblapack.so.3gf > liblapack.so.3gf /usr/lib/lapack/liblapack.so.3 > update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide > /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode > + exit 0 > Setting up libibverbs1 (1.1.6-1) ... > + set -e > + [ configure = configure ] > + getent group rdma > + addgroup --system --quiet rdma > + [ configure = configure ] > + ldconfig > Setting up libnuma1 (2.0.8~rc4-1) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up libtorque2 (2.4.16+dfsg-1+deb7u3) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up libopenmpi1.3 (1.4.5-1) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up aces3 (3.0.6-7) ... > Setting up libcr0 (0.8.5-2) ... > + [ configure = configure ] > + ldconfig > + [ configure = configure ] > + ldconfig > Setting up blcr-util (0.8.5-2) ... > Setting up openmpi-common (1.4.5-1) ... > Setting up openmpi-bin (1.4.5-1) ... > + set -e > + [ != ] > + update-alternatives --install /usr/bin/mpirun mpirun > /usr/bin/mpirun.openmpi 50 --slave /usr/share/man/man1/mpirun.1.gz > mpirun.1.gz /usr/share/man/man1/mpirun.openmpi.1.gz --slave /usr/bin/mpiexec > mpiexec /usr/bin/mpiexec.openmpi --slave /usr/share/man/man1/mpiexec.1.gz > mpiexec.1.gz /usr/share/man/man1/mpiexec.openmpi.1.gz > update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun > (mpirun) in auto mode > + exit 0 > Setting up mpi-default-bin (1.0.1) ... > Setting up libblacs-mpi1 (1.1-31) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up libint1 (1.1.4-1) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up libblas3gf (1.2.20110419-5) ... > + set -e > + update-alternatives --remove libblas.so.3gf /usr/lib/libblas/libblas.so.3 > + exit 0 > Setting up liblapack3gf (3.4.1+dfsg-1+deb70u1) ... > + set -e > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/liblapack3gf.postinst > configure > + set -e > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + update-alternatives --remove liblapack.so.3gf > /usr/lib/liblapack/liblapack.so.3 > + exit 0 > Setting up libscalapack-mpi1 (1.8.0-9) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up cp2k-data (2.2.426-8) ... > Setting up cp2k (2.2.426-8) ... > Setting up laptop-detect (0.13.7) ... > Setting up libsc-data (2.3.1-14) ... > Setting up libsc7 (2.3.1-14) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up mpqc (2.3.1-14) ... > Setting up nwchem-data (6.1-6) ... > Setting up nwchem (6.1-6) ... > Setting up psi3 (3.4.0-4) ... > Setting up quantum-espresso (5.0-1) ... > Setting up quantum-espresso-data (5.0-1) ... > Setting up abinit (5.3.4.dfsg-3) ... > Setting up openmpi-checkpoint (1.4.5-1) ... > Setting up openmx (3.5-1) ... > Setting up tasksel-data (3.14.1) ... > + set -e > + dpkg --compare-versions lt 3.14 > + [ ! -L /usr/share/doc/tasksel-data ] > Setting up tasksel (3.14.1) ... > + set -e > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/tasksel.postinst > configure > + set -e > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + [ configure = configure ] > + which update-menus > + [ -x ] > Setting up debichem-tasks (0.0.3) ... > Setting up debichem-abinitio (0.0.3) ... > + set -e > + [ -d /etc/blends -a -f /etc/blends/blends.conf ] > + exit 0 > -- Upgrading distribution: FAILED > ## Updating /etc/apt/sources.list... > ## Running apt-get update... > Get:1 http://localhost jessie Release.gpg [836 B] > Get:2 http://localhost jessie Release [190 kB] > Get:3 http://localhost jessie/main Translation-en [4632 kB] > Get:4 http://localhost jessie/main amd64 Packages [9107 kB] > Fetched 13.9 MB in 1s (7459 kB/s) > Reading package lists... > ## Running apt-get -y upgrade... > Reading package lists... > Building dependency tree... > Reading state information... > Entering ResolveByKeep > Dependencies are not satisfied for util-linux [ amd64 ] < 2.20.1-5.3 -> > 2.25.2-2 > ( utils ) > Keeping package util-linux:amd64 > Dependencies are not satisfied for sysvinit-utils [ amd64 ] < > 2.88dsf-41+deb7u1 -> 2.88dsf-57 > ( admin ) > Keeping package sysvinit-utils:amd64 > Dependencies are not satisfied for mount [ amd64 ] < 2.20.1-5.3 -> 2.25.2-2 > > ( admin ) > Keeping package mount:amd64 > Dependencies are not satisfied for libc-bin [ amd64 ] < 2.13-38+deb7u6 -> > 2.19-13 > ( libs ) > Keeping package libc-bin:amd64 > Dependencies are not satisfied for login [ amd64 ] < 1:4.1.5.1-1 -> > 1:4.2-2+b2 > ( admin ) > Keeping package login:amd64 > Dependencies are not satisfied for bsdutils [ amd64 ] < 1:2.20.1-5.3 -> > 1:2.25.2-2 > ( utils ) > Keeping package bsdutils:amd64 > Dependencies are not satisfied for base-passwd [ amd64 ] < 3.5.26 -> 3.5.37 > > ( admin ) > Keeping package base-passwd:amd64 > Dependencies are not satisfied for grep [ amd64 ] < 2.12-2 -> 2.20-4 > ( > utils ) > Keeping package grep:amd64 > Dependencies are not satisfied for sysvinit [ amd64 ] < 2.88dsf-41+deb7u1 -> > 2.88dsf-57 > ( admin ) > Keeping package sysvinit:amd64 > Dependencies are not satisfied for libselinux1 [ amd64 ] < 2.1.9-5 -> 2.3-2 > > ( libs ) > Keeping package libselinux1:amd64 > Dependencies are not satisfied for dpkg [ amd64 ] < 1.16.15 -> 1.17.21 > ( > admin ) > Keeping package dpkg:amd64 > Dependencies are not satisfied for coreutils [ amd64 ] < 8.13-3.5 -> 8.23-3 > > ( utils ) > Keeping package coreutils:amd64 > Dependencies are not satisfied for libgcc1 [ amd64 ] < 1:4.7.2-5 -> > 1:4.9.1-19 > ( libs ) > Keeping package libgcc1:amd64 > Dependencies are not satisfied for libpam0g [ amd64 ] < 1.1.3-7.1 -> > 1.1.8-3.1 > ( libs ) > Keeping package libpam0g:amd64 > Dependencies are not satisfied for libstdc++6 [ amd64 ] < 4.7.2-5 -> 4.9.1-19 > > ( libs ) > Keeping package libstdc++6:amd64 > Dependencies are not satisfied for apt [ amd64 ] < 0.9.7.9+deb7u6 -> 1.0.9.3 > > ( admin ) > Keeping package apt:amd64 > Dependencies are not satisfied for libapt-pkg4.12 [ amd64 ] < 0.9.7.9+deb7u6 > -> 1.0.9.3 > ( libs ) > Keeping package libapt-pkg4.12:amd64 > Dependencies are not satisfied for libpam-modules [ amd64 ] < 1.1.3-7.1 -> > 1.1.8-3.1 > ( admin ) > Keeping package libpam-modules:amd64 > Dependencies are not satisfied for libpam-modules [ amd64 ] < 1.1.3-7.1 -> > 1.1.8-3.1 > ( admin ) > Package libpam-modules:amd64 libpam-modules:amd64 PreDepends on > libpam-modules-bin [ amd64 ] < 1.1.3-7.1 -> 1.1.8-3.1 > ( admin ) (= > 1.1.3-7.1) > Keeping Package libpam-modules-bin:amd64 due to PreDepends > Dependencies are not satisfied for initscripts [ amd64 ] < 2.88dsf-41+deb7u1 > -> 2.88dsf-57 > ( admin ) > Keeping package initscripts:amd64 > Dependencies are not satisfied for libquadmath0 [ amd64 ] < 4.7.2-5 -> > 4.9.1-19 > ( libs ) > Keeping package libquadmath0:amd64 > Dependencies are not satisfied for libgfortran3 [ amd64 ] < 4.7.2-5 -> > 4.9.1-19 > ( libs ) > Keeping package libgfortran3:amd64 > Dependencies are not satisfied for libblas3 [ amd64 ] < 1.2.20110419-5 -> > 1.2.20110419-10 > ( libs ) > Keeping package libblas3:amd64 > Dependencies are not satisfied for apt-utils [ amd64 ] < 0.9.7.9+deb7u6 -> > 1.0.9.3 > ( admin ) > Keeping package apt-utils:amd64 > Dependencies are not satisfied for passwd [ amd64 ] < 1:4.1.5.1-1 -> > 1:4.2-2+b2 > ( admin ) > Keeping package passwd:amd64 > Dependencies are not satisfied for sysv-rc [ amd64 ] < 2.88dsf-41+deb7u1 -> > 2.88dsf-57 > ( admin ) > Keeping package sysv-rc:amd64 > Dependencies are not satisfied for libsemanage1 [ amd64 ] < 2.1.6-6 -> 2.3-1 > > ( libs ) > Keeping package libsemanage1:amd64 > Dependencies are not satisfied for libsemanage1 [ amd64 ] < 2.1.6-6 -> 2.3-1 > > ( libs ) > Package libsemanage1:amd64 libsemanage1:amd64 Depends on libsemanage-common [ > amd64 ] < 2.1.6-6 -> 2.3-1 > ( libs ) (= 2.1.6-6) > Keeping Package libsemanage-common:amd64 due to Depends > Dependencies are not satisfied for openmpi-bin [ amd64 ] < 1.4.5-1 -> 1.6.5-9 > > ( net ) > Keeping package openmpi-bin:amd64 > Dependencies are not satisfied for openmpi-bin [ amd64 ] < 1.4.5-1 -> 1.6.5-9 > > ( net ) > Package openmpi-bin:amd64 openmpi-bin:amd64 Depends on openmpi-common [ amd64 > ] < 1.4.5-1 -> 1.6.5-9 > ( net ) (= 1.4.5-1) > Keeping Package openmpi-common:amd64 due to Depends > Dependencies are not satisfied for libsc7 [ amd64 ] < 2.3.1-14 -> 2.3.1-16 > > ( libs ) > Keeping package libsc7:amd64 > Dependencies are not satisfied for libsc7 [ amd64 ] < 2.3.1-14 -> 2.3.1-16 > > ( libs ) > Package libsc7:amd64 libsc7:amd64 Depends on libsc-data [ amd64 ] < 2.3.1-14 > -> 2.3.1-16 > ( libs ) (= 2.3.1-14) > Keeping Package libsc-data:amd64 due to Depends > Dependencies are not satisfied for mpqc [ amd64 ] < 2.3.1-14 -> 2.3.1-16 > ( > science ) > Keeping package mpqc:amd64 > Dependencies are not satisfied for libgomp1 [ amd64 ] < 4.7.2-5 -> 4.9.1-19 > > ( libs ) > Keeping package libgomp1:amd64 > Dependencies are not satisfied for quantum-espresso [ amd64 ] < 5.0-1 -> > 5.1+dfsg-3 > ( science ) > Keeping package quantum-espresso:amd64 > Dependencies are not satisfied for aces3 [ amd64 ] < 3.0.6-7 -> 3.0.8-1 > ( > science ) > Keeping package aces3:amd64 > Dependencies are not satisfied for cp2k [ amd64 ] < 2.2.426-8 -> 2.5.1-3 > ( > science ) > Keeping package cp2k:amd64 > Dependencies are not satisfied for cp2k [ amd64 ] < 2.2.426-8 -> 2.5.1-3 > ( > science ) > Package cp2k:amd64 cp2k:amd64 Depends on cp2k-data [ amd64 ] < 2.2.426-8 -> > 2.5.1-3 > ( science ) (= 2.2.426-8) > Keeping Package cp2k-data:amd64 due to Depends > Dependencies are not satisfied for nwchem [ amd64 ] < 6.1-6 -> 6.5+r26243-2 > > ( science ) > Keeping package nwchem:amd64 > Dependencies are not satisfied for nwchem [ amd64 ] < 6.1-6 -> 6.5+r26243-2 > > ( science ) > Package nwchem:amd64 nwchem:amd64 Depends on nwchem-data [ amd64 ] < 6.1-6 -> > 6.5+r26243-2 > ( science ) (= 6.1-6) > Keeping Package nwchem-data:amd64 due to Depends > Dependencies are not satisfied for libfftw3-3 [ amd64 ] < 3.3.2-3.1 -> > 3.3.4-1.1 > ( libs ) > Keeping package libfftw3-3:amd64 > Dependencies are not satisfied for openmx [ amd64 ] < 3.5-1 -> 3.7.6-1 > ( > science ) > Keeping package openmx:amd64 > Dependencies are not satisfied for nvi [ amd64 ] < 1.81.6-8.2 -> 1.81.6-11+b1 > > ( editors ) > Keeping package nvi:amd64 > Dependencies are not satisfied for abinit [ amd64 ] < 5.3.4.dfsg-3 -> 7.8.2-2 > > ( science ) > Keeping package abinit:amd64 > Dependencies are not satisfied for openmpi-checkpoint [ amd64 ] < 1.4.5-1 -> > 1.6.5-9 > ( net ) > Keeping package openmpi-checkpoint:amd64 > The following packages have been kept back: > abinit aces3 apt apt-utils base-passwd bsdutils coreutils cp2k cp2k-data > dpkg grep initscripts libapt-pkg4.12 libblas3 libc-bin libfftw3-3 libgcc1 > libgfortran3 libgomp1 libpam-modules libpam-modules-bin libpam0g > libquadmath0 libsc-data libsc7 libselinux1 libsemanage-common libsemanage1 > libstdc++6 login mount mpqc nvi nwchem nwchem-data openmpi-bin > openmpi-checkpoint openmpi-common openmx passwd quantum-espresso sysv-rc > sysvinit sysvinit-utils util-linux > The following packages will be upgraded: > base-files bash blcr-util dash debconf debfoster debian-archive-keyring > debianutils diffutils dmidecode e2fslibs e2fsprogs findutils gnupg gpgv gzip > hostname less libacl1 libapt-inst1.5 libattr1 libblas3gf libblkid1 > libbz2-1.0 libc6 libcomerr2 libcr0 libgc1c2 libibverbs1 libint1 liblapack3 > liblapack3gf liblocale-gettext-perl liblzma5 libmount1 libncurses5 > libncursesw5 libnuma1 libpam-runtime libreadline6 libsepol1 libslang2 libss2 > libtinfo5 libtorque2 libusb-0.1-4 libuuid1 lsb-base mpi-default-bin > multiarch-support ncurses-base ncurses-bin perl-base psi3 > quantum-espresso-data readline-common sed sensible-utils tar tasksel > tasksel-data tzdata zlib1g > 63 upgraded, 0 newly installed, 0 to remove and 45 not upgraded. > Need to get 33.7 MB of archives. > After this operation, 23.6 MB of additional disk space will be used. > Get:1 http://localhost/debian/ jessie/main base-files amd64 7.10 [77.7 kB] > Get:2 http://localhost/debian/ jessie/main libc6 amd64 2.19-13 [4660 kB] > Get:3 http://localhost/debian/ jessie/main sensible-utils all 0.0.9 [11.3 kB] > Get:4 http://localhost/debian/ jessie/main debianutils amd64 4.4+b1 [99.1 kB] > Get:5 http://localhost/debian/ jessie/main bash amd64 4.3-11 [1174 kB] > Get:6 http://localhost/debian/ jessie/main dash amd64 0.5.7-4+b1 [109 kB] > Get:7 http://localhost/debian/ jessie/main diffutils amd64 1:3.3-1+b1 [267 kB] > Get:8 http://localhost/debian/ jessie/main e2fslibs amd64 1.42.12-1 [185 kB] > Get:9 http://localhost/debian/ jessie/main e2fsprogs amd64 1.42.12-1 [751 kB] > Get:10 http://localhost/debian/ jessie/main findutils amd64 4.4.2-9+b1 [485 > kB] > Get:11 http://localhost/debian/ jessie/main gzip amd64 1.6-4 [111 kB] > Get:12 http://localhost/debian/ jessie/main hostname amd64 3.15 [13.9 kB] > Get:13 http://localhost/debian/ jessie/main libncursesw5 amd64 5.9+20140913-1 > [123 kB] > Get:14 http://localhost/debian/ jessie/main libtinfo5 amd64 5.9+20140913-1 > [282 kB] > Get:15 http://localhost/debian/ jessie/main libncurses5 amd64 5.9+20140913-1 > [96.7 kB] > Get:16 http://localhost/debian/ jessie/main ncurses-bin amd64 5.9+20140913-1 > [346 kB] > Get:17 http://localhost/debian/ jessie/main perl-base amd64 5.20.1-2 [1202 kB] > Get:18 http://localhost/debian/ jessie/main liblocale-gettext-perl amd64 > 1.05-8+b1 [19.0 kB] > Get:19 http://localhost/debian/ jessie/main sed amd64 4.2.2-4+b1 [243 kB] > Get:20 http://localhost/debian/ jessie/main tar amd64 1.27.1-2+b1 [676 kB] > Get:21 http://localhost/debian/ jessie/main ncurses-base all 5.9+20140913-1 > [222 kB] > Get:22 http://localhost/debian/ jessie/main libbz2-1.0 amd64 1.0.6-7+b1 [43.4 > kB] > Get:23 http://localhost/debian/ jessie/main readline-common all 6.3-8 [57.7 > kB] > Get:24 http://localhost/debian/ jessie/main libreadline6 amd64 6.3-8+b1 [143 > kB] > Get:25 http://localhost/debian/ jessie/main libslang2 amd64 2.3.0-2 [491 kB] > Get:26 http://localhost/debian/ jessie/main libusb-0.1-4 amd64 2:0.1.12-25 > [21.9 kB] > Get:27 http://localhost/debian/ jessie/main debconf all 1.5.53 [168 kB] > Get:28 http://localhost/debian/ jessie/main libattr1 amd64 1:2.4.47-2 [18.3 > kB] > Get:29 http://localhost/debian/ jessie/main libacl1 amd64 2.2.52-2 [27.9 kB] > Get:30 http://localhost/debian/ jessie/main libuuid1 amd64 2.25.2-2 [63.7 kB] > Get:31 http://localhost/debian/ jessie/main libblkid1 amd64 2.25.2-2 [155 kB] > Get:32 http://localhost/debian/ jessie/main libcomerr2 amd64 1.42.12-1 [60.4 > kB] > Get:33 http://localhost/debian/ jessie/main liblzma5 amd64 > 5.1.1alpha+20120614-2+b1 [194 kB] > Get:34 http://localhost/debian/ jessie/main libmount1 amd64 2.25.2-2 [163 kB] > Get:35 http://localhost/debian/ jessie/main libsepol1 amd64 2.3-2 [127 kB] > Get:36 http://localhost/debian/ jessie/main libss2 amd64 1.42.12-1 [64.7 kB] > Get:37 http://localhost/debian/ jessie/main zlib1g amd64 1:1.2.8.dfsg-2 [88.2 > kB] > Get:38 http://localhost/debian/ jessie/main libapt-inst1.5 amd64 1.0.9.3 [168 > kB] > Get:39 http://localhost/debian/ jessie/main tasksel-data all 3.29 [18.1 kB] > Get:40 http://localhost/debian/ jessie/main tasksel all 3.29 [95.4 kB] > Get:41 http://localhost/debian/ jessie/main libgc1c2 amd64 1:7.2d-6.4 [132 kB] > Get:42 http://localhost/debian/ jessie/main libnuma1 amd64 2.0.10-1 [32.5 kB] > Get:43 http://localhost/debian/ jessie/main gpgv amd64 1.4.18-4 [206 kB] > Get:44 http://localhost/debian/ jessie/main debian-archive-keyring all 2014.1 > [30.1 kB] > Get:45 http://localhost/debian/ jessie/main gnupg amd64 1.4.18-4 [1143 kB] > Get:46 http://localhost/debian/ jessie/main libpam-runtime all 1.1.8-3.1 [212 > kB] > Get:47 http://localhost/debian/ jessie/main lsb-base all 4.1+Debian13+nmu1 > [26.7 kB] > Get:48 http://localhost/debian/ jessie/main multiarch-support amd64 2.19-13 > [178 kB] > Get:49 http://localhost/debian/ jessie/main tzdata all 2014i-1 [189 kB] > Get:50 http://localhost/debian/ jessie/main dmidecode amd64 2.12-3 [64.4 kB] > Get:51 http://localhost/debian/ jessie/main less amd64 458-3 [124 kB] > Get:52 http://localhost/debian/ jessie/main libcr0 amd64 0.8.5-2.1 [32.4 kB] > Get:53 http://localhost/debian/ jessie/main blcr-util amd64 0.8.5-2.1 [40.4 > kB] > Get:54 http://localhost/debian/ jessie/main debfoster amd64 2.7-2 [36.9 kB] > Get:55 http://localhost/debian/ jessie/main libblas3gf all 1.2.20110419-10 > [8640 B] > Get:56 http://localhost/debian/ jessie/main libint1 amd64 1.1.5-1 [1110 kB] > Get:57 http://localhost/debian/ jessie/main liblapack3 amd64 3.5.0-4 [1852 kB] > Get:58 http://localhost/debian/ jessie/main liblapack3gf all 3.5.0-4 [12.5 kB] > Get:59 http://localhost/debian/ jessie/main libtorque2 amd64 2.4.16+dfsg-1.5 > [105 kB] > Get:60 http://localhost/debian/ jessie/main psi3 amd64 3.4.0-5 [3696 kB] > Get:61 http://localhost/debian/ jessie/main quantum-espresso-data all > 5.1+dfsg-3 [11.1 MB] > Get:62 http://localhost/debian/ jessie/main libibverbs1 amd64 1.1.8-1 [32.0 > kB] > Get:63 http://localhost/debian/ jessie/main mpi-default-bin amd64 1.0.2+nmu2 > [3356 B] > Extracting templates from packages: 47% Extracting templates from packages: 95% Extracting templates from packages: 100% > Preconfiguring packages ... > Fetched 33.7 MB in 1s (19.6 MB/s) > (Reading database ... 11626 files and directories currently installed.) > Preparing to replace base-files 7.1wheezy7 (using > .../base-files_7.10_amd64.deb) ... > Unpacking replacement base-files ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/base-files.postinst > Setting up base-files (7.10) ... > Installing new version of config file /etc/debian_version ... > Installing new version of config file /etc/issue ... > Installing new version of config file /etc/issue.net ... > + set -e > + [ ! -e /etc/dpkg/origins/default ] > + [ configure = configure ] > + [ 7.1wheezy7 = ] > + [ ! -d /var/lib/dpkg ] > + [ ! -f /var/lib/dpkg/status ] > + [ ! -f /usr/info/dir ] > + [ ! -f /usr/share/info/dir ] > + [ configure = configure ] > + [ 7.1wheezy7 != ] > + update_to_current_default profile > + [ -f /etc/profile ] > + md5sum /etc/profile > + cut -f 1 -d > + md5=91901ce5707909cfec8b3a1a6efbfa61 > + grep -q 91901ce5707909cfec8b3a1a6efbfa61 > /usr/share/base-files/profile.md5sums > + cmp -s /usr/share/base-files/profile /etc/profile > + cp -p /usr/share/base-files/profile /etc/profile > + echo Updating /etc/profile to current default. > Updating /etc/profile to current default. > + update_to_current_default nsswitch.conf > + [ -f /etc/nsswitch.conf ] > + md5sum /etc/nsswitch.conf > + cut -f 1 -d > + md5=295c15c4bdac80e50b37689ef08f359c > + grep -q 295c15c4bdac80e50b37689ef08f359c > /usr/share/base-files/nsswitch.conf.md5sums > + cmp -s /usr/share/base-files/nsswitch.conf /etc/nsswitch.conf > + cp -p /usr/share/base-files/nsswitch.conf /etc/nsswitch.conf > + echo Updating /etc/nsswitch.conf to current default. > Updating /etc/nsswitch.conf to current default. > + dpkg --compare-versions 7.1wheezy7 lt-nl 7.7 > + install_directory mnt 755 root > + [ ! -d /mnt ] > + mkdir /mnt > + chown root:root /mnt > + chmod 755 /mnt > + dpkg --compare-versions 7.1wheezy7 lt-nl 6.10 > (Reading database ... 11627 files and directories currently installed.) > Preparing to replace libc6:amd64 2.13-38+deb7u6 (using > .../libc6_2.19-13_amd64.deb) ... > + set -e > + export LC_ALL=C > + type=upgrade > + [ x2.19-13 != xin-favour ] > + preversion=2.19-13 > + [ upgrade = upgrade ] > + dpkg --compare-versions 2.19-13 lt 2.13-17 > + [ -n 2.19-13 ] > + dpkg --compare-versions 2.19-13 lt 2.13-5 > + exit 0 > Checking for services that may need to be restarted... > Checking init scripts... > Unpacking replacement libc6:amd64 ... > + set -e > + [ upgrade = remove ] > + [ upgrade = deconfigure ] > + [ upgrade = purge ] > + [ upgrade = remove ] > + exit 0 > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libc6:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libc6:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libc6:amd64.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libc6:amd64.prerm > Setting up libc6:amd64 (2.19-13) ... > + set -e > + export LC_ALL=C > + type=configure > + preversion=2.13-38+deb7u6 > + [ configure = configure ] > + rm -f /etc/ld.so.hwcappkgs > + dpkg --print-architecture > + all_upgraded=yes > + [ -n ] > + [ yes = yes ] > + rm -f /etc/ld.so.nohwcap > + [ -f /usr/share/debconf/confmodule ] > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/libc6:amd64.postinst > configure 2.13-38+deb7u6 > + set -e > + export LC_ALL=C > + type=configure > + preversion=2.13-38+deb7u6 > + [ configure = configure ] > + rm -f /etc/ld.so.hwcappkgs > + dpkg --print-architecture > + all_upgraded=yes > + [ -n ] > + [ yes = yes ] > + rm -f /etc/ld.so.nohwcap > + [ -f /usr/share/debconf/confmodule ] > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + [ -n 2.13-38+deb7u6 ] > + [ ! -d /var/mail ] > + dpkg --compare-versions 2.13-38+deb7u6 lt 2.19 > + check=apache2.2-common apache apache-ssl apache-perl autofs at > + check=apache2.2-common apache apache-ssl apache-perl autofs at boa cucipop > courier-authdaemon cron cups exim > + check=apache2.2-common apache apache-ssl apache-perl autofs at boa cucipop > courier-authdaemon cron cups exim exim4-base dovecot-common cucipop incron > lprng lpr > + check=apache2.2-common apache apache-ssl apache-perl autofs at boa cucipop > courier-authdaemon cron cups exim exim4-base dovecot-common cucipop incron > lprng lpr lpr-ppd mysql-server nis openbsd-inetd > + check=apache2.2-common apache apache-ssl apache-perl autofs at boa cucipop > courier-authdaemon cron cups exim exim4-base dovecot-common cucipop incron > lprng lpr lpr-ppd mysql-server nis openbsd-inetd openldapd proftpd postfix > postfix-tls rsync samba > + check=apache2.2-common apache apache-ssl apache-perl autofs at boa cucipop > courier-authdaemon cron cups exim exim4-base dovecot-common cucipop incron > lprng lpr lpr-ppd mysql-server nis openbsd-inetd openldapd proftpd postfix > postfix-tls rsync samba sasl2-bin slapd smail sendmail snmpd ssh > + check=apache2.2-common apache apache-ssl apache-perl autofs at boa cucipop > courier-authdaemon cron cups exim exim4-base dovecot-common cucipop incron > lprng lpr lpr-ppd mysql-server nis openbsd-inetd openldapd proftpd postfix > postfix-tls rsync samba sasl2-bin slapd smail sendmail snmpd ssh spamassassin > vsftpd wu-ftpd wu-ftpd-academ wwwoffle > + check=apache2.2-common apache apache-ssl apache-perl autofs at boa cucipop > courier-authdaemon cron cups exim exim4-base dovecot-common cucipop incron > lprng lpr lpr-ppd mysql-server nis openbsd-inetd openldapd proftpd postfix > postfix-tls rsync samba sasl2-bin slapd smail sendmail snmpd ssh spamassassin > vsftpd wu-ftpd wu-ftpd-academ wwwoffle webmin dropbear gdm > + echo -n Checking for services that may need to be restarted... > Checking for services that may need to be restarted...+ dpkg -s > apache2.2-common apache apache-ssl apache-perl autofs at boa cucipop > courier-authdaemon cron cups exim exim4-base dovecot-common cucipop incron > lprng lpr lpr-ppd mysql-server nis openbsd-inetd openldapd proftpd postfix > postfix-tls rsync samba sasl2-bin slapd smail sendmail snmpd ssh spamassassin > vsftpd wu-ftpd wu-ftpd-academ wwwoffle webmin dropbear gdm > + egrep ^Package:|^Status: > + awk {if ($1 ~ /^Package:/) { package=$2 } else if ($0 ~ /^Status: .* > installed$/) { print package }} > + check= > + echo > + sed -es/\bapache2.2-common\b/apache2/g -es/\bat\b/atd/g > -es/\bdovecot-common\b/dovecot/g -es/\bexim4-base\b/exim4/g -es/\blpr\b/lpd/g > -es/\blpr-ppd\b/lpd-ppd/g -es/\bmysql-server\b/mysql/g > -es/\bsasl2-bin\b/saslauthd/g > + check= > + echo > > + echo Checking init scripts... > Checking init scripts... > + runlevel > + sed s/.*\ // > + rl=unknown > + [ -n ] > + echo Nothing to restart. > Nothing to restart. > + TELINIT=yes > + ischroot > + TELINIT=no > + [ no = yes ] > + [ configure = configure ] > + ldconfig > + exit 0 > (Reading database ... 11630 files and directories currently installed.) > Preparing to replace sensible-utils 0.0.7 (using > .../sensible-utils_0.0.9_all.deb) ... > Unpacking replacement sensible-utils ... > + set -e > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/sensible-utils.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/sensible-utils.postrm > Setting up sensible-utils (0.0.9) ... > + set -e > + which update-mime > (Reading database ... 11632 files and directories currently installed.) > Preparing to replace debianutils 4.3.2 (using > .../debianutils_4.4+b1_amd64.deb) ... > Unpacking replacement debianutils ... > + set -e > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debianutils.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debianutils.postrm > Setting up debianutils (4.4+b1) ... > + test -z 4.3.2 > + which update-mime > (Reading database ... 11653 files and directories currently installed.) > Preparing to replace bash 4.2+dfsg-0.1+deb7u3 (using > .../archives/bash_4.3-11_amd64.deb) ... > + set -e > + case "$1" in > + update-alternatives --remove builtins.7.gz > /usr/share/man/man7/bash-builtins.7.gz > Unpacking replacement bash ... > + set -e > + which update-menus > + [ -x ] > + exit 0 > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/bash.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/bash.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/bash.prerm > Setting up bash (4.3-11) ... > Installing new version of config file /etc/bash.bashrc ... > Installing new version of config file /etc/skel/.bashrc ... > + set -e > + '[' '!' -e /bin/sh ']' > + update-alternatives --install /usr/share/man/man7/builtins.7.gz > builtins.7.gz /usr/share/man/man7/bash-builtins.7.gz 10 > update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide > /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode > + '[' configure = configure ']' > + dpkg --compare-versions 4.2+dfsg-0.1+deb7u3 le 3.2-3 > + '[' configure = configure ']' > ++ which update-menus > + '[' -x '' ']' > + exit 0 > (Reading database ... 11661 files and directories currently installed.) > Preparing to replace dash 0.5.7-3 (using .../dash_0.5.7-4+b1_amd64.deb) ... > + set -e > + [ upgrade = remove ] > + [ upgrade = deconfigure ] > + [ upgrade = remove ] > Unpacking replacement dash ... > + set -e > + test upgrade != upgrade > + dpkg --compare-versions 0.5.7-4+b1 ge 0.5.2-3 > + test upgrade != remove > + test upgrade = purge > + exit 0 > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dash.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dash.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dash.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/dash.prerm > Setting up dash (0.5.7-4+b1) ... > + set -e > + debconf= > + [ -f /usr/share/debconf/confmodule ] > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/dash.postinst configure > 0.5.7-3 > + set -e > + debconf= > + [ -f /usr/share/debconf/confmodule ] > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + debconf=yes > + [ configure = configure ] > + [ -z 0.5.7-3 ] > + [ configure = configure ] > + dpkg --compare-versions 0.5.7-3 lt 0.4.18 > + [ yes ] > + db_get dash/sh > + _db_cmd GET dash/sh > + _db_internal_IFS= > > + IFS= > + printf %s\n GET dash/sh > + IFS= > > + IFS= > read -r _db_internal_line > + RET=true > + return 0 > + check_divert true /bin/sh dash > + dfile=/bin/sh > + ltarget=dash > + distrib=/bin/sh.distrib > + dpkg-divert --listpackage /bin/sh > + diverter=dash > + dpkg-divert --truename /bin/sh > + truename=/bin/sh.distrib > + [ dash != dash ] > + check_divert true /usr/share/man/man1/sh.1.gz dash.1.gz > /usr/share/man/man1/sh.distrib.1.gz > + dfile=/usr/share/man/man1/sh.1.gz > + ltarget=dash.1.gz > + distrib=/usr/share/man/man1/sh.distrib.1.gz > + dpkg-divert --listpackage /usr/share/man/man1/sh.1.gz > + diverter=dash > + dpkg-divert --truename /usr/share/man/man1/sh.1.gz > + truename=/usr/share/man/man1/sh.distrib.1.gz > + [ dash != dash ] > + test configure = configure > + test -x /usr/bin/update-menus > + exit 0 > (Reading database ... 11661 files and directories currently installed.) > Preparing to replace diffutils 1:3.2-6 (using > .../diffutils_1%3a3.3-1+b1_amd64.deb) ... > Unpacking replacement diffutils ... > Setting up diffutils (1:3.3-1+b1) ... > (Reading database ... 11663 files and directories currently installed.) > Preparing to replace e2fslibs:amd64 1.42.5-1.1 (using > .../e2fslibs_1.42.12-1_amd64.deb) ... > Unpacking replacement e2fslibs:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/e2fslibs:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/e2fslibs:amd64.postrm > Setting up e2fslibs:amd64 (1.42.12-1) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11663 files and directories currently installed.) > Preparing to replace e2fsprogs 1.42.5-1.1 (using > .../e2fsprogs_1.42.12-1_amd64.deb) ... > Unpacking replacement e2fsprogs ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/e2fsprogs.preinst > Setting up e2fsprogs (1.42.12-1) ... > (Reading database ... 11668 files and directories currently installed.) > Preparing to replace findutils 4.4.2-4 (using > .../findutils_4.4.2-9+b1_amd64.deb) ... > Unpacking replacement findutils ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/findutils.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/findutils.preinst > Setting up findutils (4.4.2-9+b1) ... > + set -e > + [ configure = configure ] > + dpkg --compare-versions 4.4.2-4 le-nl 4.1.7-2 > + [ -d /var/cache/locate/ ] > (Reading database ... 11669 files and directories currently installed.) > Preparing to replace gzip 1.5-1.1 (using .../archives/gzip_1.6-4_amd64.deb) > ... > Unpacking replacement gzip ... > Setting up gzip (1.6-4) ... > (Reading database ... 11668 files and directories currently installed.) > Preparing to replace hostname 3.11 (using .../hostname_3.15_amd64.deb) ... > Unpacking replacement hostname ... > Setting up hostname (3.15) ... > (Reading database ... 11668 files and directories currently installed.) > Preparing to replace libncursesw5:amd64 5.9-10 (using > .../libncursesw5_5.9+20140913-1_amd64.deb) ... > Unpacking replacement libncursesw5:amd64 ... > + set -e > + [ upgrade = remove ] > Preparing to replace libtinfo5:amd64 5.9-10 (using > .../libtinfo5_5.9+20140913-1_amd64.deb) ... > Unpacking replacement libtinfo5:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libncursesw5:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libtinfo5:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libncursesw5:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libtinfo5:amd64.postrm > Setting up libtinfo5:amd64 (5.9+20140913-1) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11668 files and directories currently installed.) > Preparing to replace libncurses5:amd64 5.9-10 (using > .../libncurses5_5.9+20140913-1_amd64.deb) ... > Unpacking replacement libncurses5:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libncurses5:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libncurses5:amd64.postrm > Setting up libncurses5:amd64 (5.9+20140913-1) ... > + set -e > + PACKAGE=libncurses5 > + dpkg --compare-versions 5.9-10 lt-nl 5.9-7 > + [ configure = configure ] > + ldconfig > + exit 0 > (Reading database ... 11668 files and directories currently installed.) > Preparing to replace ncurses-bin 5.9-10 (using > .../ncurses-bin_5.9+20140913-1_amd64.deb) ... > Unpacking replacement ncurses-bin ... > Setting up ncurses-bin (5.9+20140913-1) ... > (Reading database ... 11666 files and directories currently installed.) > Preparing to replace perl-base 5.14.2-21+deb7u2 (using > .../perl-base_5.20.1-2_amd64.deb) ... > Unpacking replacement perl-base ... > Setting up perl-base (5.20.1-2) ... > (Reading database ... 11166 files and directories currently installed.) > Preparing to replace liblocale-gettext-perl 1.05-7+b1 (using > .../liblocale-gettext-perl_1.05-8+b1_amd64.deb) ... > Unpacking replacement liblocale-gettext-perl ... > Preparing to replace sed 4.2.1-10 (using .../sed_4.2.2-4+b1_amd64.deb) ... > Unpacking replacement sed ... > Setting up sed (4.2.2-4+b1) ... > (Reading database ... 11169 files and directories currently installed.) > Preparing to replace tar 1.26+dfsg-0.1 (using .../tar_1.27.1-2+b1_amd64.deb) > ... > + set -e > Unpacking replacement tar ... > + set -e > + which update-mime > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tar.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tar.prerm > Setting up tar (1.27.1-2+b1) ... > + set -e > + update-alternatives --install /usr/sbin/rmt rmt /usr/sbin/rmt-tar 50 > --slave /usr/share/man/man8/rmt.8.gz rmt.8.gz /usr/share/man/man8/rmt-tar.8.gz > (Reading database ... 11174 files and directories currently installed.) > Preparing to replace ncurses-base 5.9-10 (using > .../ncurses-base_5.9+20140913-1_all.deb) ... > Unpacking replacement ncurses-base ... > Setting up ncurses-base (5.9+20140913-1) ... > (Reading database ... 11174 files and directories currently installed.) > Preparing to replace libbz2-1.0:amd64 1.0.6-4 (using > .../libbz2-1.0_1.0.6-7+b1_amd64.deb) ... > Unpacking replacement libbz2-1.0:amd64 ... > + set -eu > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libbz2-1.0:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libbz2-1.0:amd64.postrm > Setting up libbz2-1.0:amd64 (1.0.6-7+b1) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11175 files and directories currently installed.) > Preparing to replace readline-common 6.2+dfsg-0.1 (using > .../readline-common_6.3-8_all.deb) ... > Unpacking replacement readline-common ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/readline-common.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/readline-common.postrm > Setting up readline-common (6.3-8) ... > + [ configure = configure ] > + [ 6.2+dfsg-0.1 = ] > (Reading database ... 11176 files and directories currently installed.) > Preparing to replace libreadline6:amd64 6.2+dfsg-0.1 (using > .../libreadline6_6.3-8+b1_amd64.deb) ... > Unpacking replacement libreadline6:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libreadline6:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libreadline6:amd64.postrm > Setting up libreadline6:amd64 (6.3-8+b1) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11177 files and directories currently installed.) > Preparing to replace libslang2:amd64 2.2.4-15 (using > .../libslang2_2.3.0-2_amd64.deb) ... > Unpacking replacement libslang2:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libslang2:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libslang2:amd64.postrm > Setting up libslang2:amd64 (2.3.0-2) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11177 files and directories currently installed.) > Preparing to replace libusb-0.1-4:amd64 2:0.1.12-20+nmu1 (using > .../libusb-0.1-4_2%3a0.1.12-25_amd64.deb) ... > Unpacking replacement libusb-0.1-4:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libusb-0.1-4:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libusb-0.1-4:amd64.postrm > Setting up libusb-0.1-4:amd64 (2:0.1.12-25) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11178 files and directories currently installed.) > Preparing to replace debconf 1.5.49 (using .../debconf_1.5.53_all.deb) ... > + set -e > + dpkg -L debconf > + awk $0~/\.py$/ {print $0"c\n" $0"o"} > + xargs rm -f > + which pyclean > + dpkg -L debconf > + grep .py$ > + read file > + rm -f /usr/share/pyshared/debconf.py[co] > + read file > + rm -f /usr/lib/python3/dist-packages/debconf.py[co] > + read file > + rm -f /usr/lib/python2.7/dist-packages/debconf.py[co] > + read file > + rm -f /usr/lib/python2.6/dist-packages/debconf.py[co] > + read file > + which py3clean > + exit 0 > Unpacking replacement debconf ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debconf.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debconf.preinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debconf.prerm > Setting up debconf (1.5.53) ... > + set -e > + [ -z ] > + [ configure = configure ] > + [ -n 1.5.49 ] > + dpkg --compare-versions 1.5.49 lt 1.1.0 > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/debconf.postinst > configure 1.5.49 > + set -e > + [ -z 1 ] > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + [ configure = configure ] > + [ -n 1.5.49 ] > + dpkg --compare-versions 1.5.49 lt 1.3.11 > + which pycompile > + which py3compile > (Reading database ... 11175 files and directories currently installed.) > Preparing to replace libattr1:amd64 1:2.4.46-8 (using > .../libattr1_1%3a2.4.47-2_amd64.deb) ... > Unpacking replacement libattr1:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libattr1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libattr1:amd64.postrm > Setting up libattr1:amd64 (1:2.4.47-2) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11175 files and directories currently installed.) > Preparing to replace libacl1:amd64 2.2.51-8 (using > .../libacl1_2.2.52-2_amd64.deb) ... > Unpacking replacement libacl1:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libacl1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libacl1:amd64.postrm > Setting up libacl1:amd64 (2.2.52-2) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11175 files and directories currently installed.) > Preparing to replace libuuid1:amd64 2.20.1-5.3 (using > .../libuuid1_2.25.2-2_amd64.deb) ... > Unpacking replacement libuuid1:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libuuid1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libuuid1:amd64.postrm > Setting up libuuid1:amd64 (2.25.2-2) ... > + set -e > + getent group libuuid > + getent group uuidd > + groupmod --new-name uuidd libuuid > + getent passwd libuuid > + getent passwd uuidd > + invoke-rc.d --quiet uuidd stop > + true > + usermod --login uuidd --shell /bin/false --home /run/uuidd libuuid > + [ -d /var/lib/libuuid ] > + [ configure = configure ] > + ldconfig > (Reading database ... 11174 files and directories currently installed.) > Preparing to replace libblkid1:amd64 2.20.1-5.3 (using > .../libblkid1_2.25.2-2_amd64.deb) ... > Unpacking replacement libblkid1:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libblkid1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libblkid1:amd64.postrm > Setting up libblkid1:amd64 (2.25.2-2) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11174 files and directories currently installed.) > Preparing to replace libcomerr2:amd64 1.42.5-1.1 (using > .../libcomerr2_1.42.12-1_amd64.deb) ... > Unpacking replacement libcomerr2:amd64 ... > + set -e > + [ upgrade = remove ] > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libcomerr2:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libcomerr2:amd64.postrm > Setting up libcomerr2:amd64 (1.42.12-1) ... > + set -e > + [ configure = configure ] > + ldconfig > + [ configure = configure ] > + ldconfig > (Reading database ... 11174 files and directories currently installed.) > Preparing to replace liblzma5:amd64 5.1.1alpha+20120614-2 (using > .../liblzma5_5.1.1alpha+20120614-2+b1_amd64.deb) ... > Unpacking replacement liblzma5:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/liblzma5:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/liblzma5:amd64.postrm > Setting up liblzma5:amd64 (5.1.1alpha+20120614-2+b1) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11175 files and directories currently installed.) > Preparing to replace libmount1 2.20.1-5.3 (using > .../libmount1_2.25.2-2_amd64.deb) ... > Unpacking replacement libmount1:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libmount1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libmount1:amd64.postrm > Setting up libmount1:amd64 (2.25.2-2) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11175 files and directories currently installed.) > Preparing to replace libsepol1:amd64 2.1.4-3 (using > .../libsepol1_2.3-2_amd64.deb) ... > Unpacking replacement libsepol1:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libsepol1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libsepol1:amd64.postrm > Setting up libsepol1:amd64 (2.3-2) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11175 files and directories currently installed.) > Preparing to replace libss2:amd64 1.42.5-1.1 (using > .../libss2_1.42.12-1_amd64.deb) ... > Unpacking replacement libss2:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libss2:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libss2:amd64.postrm > Setting up libss2:amd64 (1.42.12-1) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11175 files and directories currently installed.) > Preparing to replace zlib1g:amd64 1:1.2.7.dfsg-13 (using > .../zlib1g_1%3a1.2.8.dfsg-2_amd64.deb) ... > Unpacking replacement zlib1g:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/zlib1g:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/zlib1g:amd64.postrm > Setting up zlib1g:amd64 (1:1.2.8.dfsg-2) ... > + set -e > + [ configure = configure ] > + ldconfig > (Reading database ... 11175 files and directories currently installed.) > Preparing to replace libapt-inst1.5:amd64 0.9.7.9+deb7u6 (using > .../libapt-inst1.5_1.0.9.3_amd64.deb) ... > Unpacking replacement libapt-inst1.5:amd64 ... > + set -e > + [ upgrade = remove ] > Preparing to replace tasksel-data 3.14.1 (using > .../tasksel-data_3.29_all.deb) ... > Unpacking replacement tasksel-data ... > Preparing to replace tasksel 3.14.1 (using .../archives/tasksel_3.29_all.deb) > ... > Unpacking replacement tasksel ... > + set -e > + which update-menus > + [ -x ] > + [ upgrade = purge ] > Preparing to replace libgc1c2 1:7.1-9.1 (using > .../libgc1c2_1%3a7.2d-6.4_amd64.deb) ... > Unpacking replacement libgc1c2:amd64 ... > + set -e > + [ upgrade = remove ] > Preparing to replace libnuma1 2.0.8~rc4-1 (using > .../libnuma1_2.0.10-1_amd64.deb) ... > Unpacking replacement libnuma1:amd64 ... > + set -e > + [ upgrade = remove ] > Preparing to replace gpgv 1.4.12-7+deb7u6 (using .../gpgv_1.4.18-4_amd64.deb) > ... > Unpacking replacement gpgv ... > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libapt-inst1.5:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libgc1c2:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libnuma1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tasksel-data.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tasksel.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libapt-inst1.5:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libgc1c2:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libnuma1:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tasksel.postrm > Setting up gpgv (1.4.18-4) ... > (Reading database ... 11178 files and directories currently installed.) > Preparing to replace debian-archive-keyring 2014.1~deb7u1 (using > .../debian-archive-keyring_2014.1_all.deb) ... > Unpacking replacement debian-archive-keyring ... > + set -e > + [ upgrade = purge ] > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/debian-archive-keyring.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/debian-archive-keyring.postrm > Setting up debian-archive-keyring (2014.1) ... > + set -e > + [ configure = configure -a -n 2014.1~deb7u1 ] > + dpkg --compare-versions 2014.1~deb7u1 lt 2012.1 > (Reading database ... 11178 files and directories currently installed.) > Preparing to replace gnupg 1.4.12-7+deb7u6 (using > .../gnupg_1.4.18-4_amd64.deb) ... > Unpacking replacement gnupg ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/gnupg.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/gnupg.preinst > Setting up gnupg (1.4.18-4) ... > + set -e > + [ configure = configure ] > + [ -e /etc/udev/rules.d/z60_gnupg.rules ] > (Reading database ... 11177 files and directories currently installed.) > Preparing to replace libpam-runtime 1.1.3-7.1 (using > .../libpam-runtime_1.1.8-3.1_all.deb) ... > + set -e > + [ upgrade = remove ] > Unpacking replacement libpam-runtime ... > + [ upgrade = purge ] > + [ upgrade = purge ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libpam-runtime.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libpam-runtime.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libpam-runtime.prerm > Setting up libpam-runtime (1.1.8-3.1) ... > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/libpam-runtime.postinst > configure 1.1.3-7.1 > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + force= > + [ -z 1.1.3-7.1 ] > + dpkg --compare-versions 1.1.3-7.1 lt 1.0.1-11 > + pam-auth-update --package > + [ -n ] > + dpkg --compare-versions 1.1.3-7.1 lt-nl 1.1.0-1 > (Reading database ... 11227 files and directories currently installed.) > Preparing to replace lsb-base 4.1+Debian8+deb7u1 (using > .../lsb-base_4.1+Debian13+nmu1_all.deb) ... > Unpacking replacement lsb-base ... > Setting up lsb-base (4.1+Debian13+nmu1) ... > (Reading database ... 11227 files and directories currently installed.) > Preparing to replace multiarch-support 2.13-38+deb7u6 (using > .../multiarch-support_2.19-13_amd64.deb) ... > Unpacking replacement multiarch-support ... > Setting up multiarch-support (2.19-13) ... > (Reading database ... 11227 files and directories currently installed.) > Preparing to replace tzdata 2014h-0wheezy1 (using .../tzdata_2014i-1_all.deb) > ... > Unpacking replacement tzdata ... > + set -e > + [ upgrade = purge ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tzdata.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/tzdata.postrm > Setting up tzdata (2014i-1) ... > + set -e > + LC_ALL=C > + LANG=C > + unset TZ > + umask 022 > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/tzdata.postinst > configure 2014h-0wheezy1 > + set -e > + LC_ALL=C > + LANG=C > + unset TZ > + umask 022 > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + db_version 2.0 > + _db_cmd VERSION 2.0 > + _db_internal_IFS= > > + IFS= > + printf %s\n VERSION 2.0 > + IFS= > > + IFS= > read -r _db_internal_line > + RET=2.0 > + return 0 > + [ configure = configure ] > + [ -e /etc/timezone ] > + AREA=Etc > + ZONE=UTC > + db_get tzdata/Areas > + _db_cmd GET tzdata/Areas > + _db_internal_IFS= > > + IFS= > + printf %s\n GET tzdata/Areas > + IFS= > > + IFS= > read -r _db_internal_line > + RET=Etc > + return 0 > + AREA=Etc > + db_get tzdata/Zones/Etc > + _db_cmd GET tzdata/Zones/Etc > + _db_internal_IFS= > > + IFS= > + printf %s\n GET tzdata/Zones/Etc > + IFS= > > + IFS= > read -r _db_internal_line > + RET=UTC > + return 0 > + ZONE=UTC > + db_stop > + echo STOP > + echo Etc/UTC > + cp -f /usr/share/zoneinfo/Etc/UTC /etc/localtime.dpkg-new > + mv -f /etc/localtime.dpkg-new /etc/localtime > + which restorecon > + echo > > + echo Current default time zone: 'Etc/UTC' > Current default time zone: 'Etc/UTC' > + LC_ALL=C TZ=UTC0 date > + TZBase=Thu Nov 13 10:49:15 UTC 2014 > + LC_ALL=C TZ=UTC0 date -d Thu Nov 13 10:49:15 UTC 2014 > + UTdate=Thu Nov 13 10:49:15 UTC 2014 > + unset TZ > + LANG=C date -d Thu Nov 13 10:49:15 UTC 2014 > + TZdate=Thu Nov 13 10:49:15 UTC 2014 > + echo Local time is now: Thu Nov 13 10:49:15 UTC 2014. > Local time is now: Thu Nov 13 10:49:15 UTC 2014. > + echo Universal Time is now: Thu Nov 13 10:49:15 UTC 2014. > Universal Time is now: Thu Nov 13 10:49:15 UTC 2014. > + [ -z ] > + echo Run 'dpkg-reconfigure tzdata' if you wish to change it. > Run 'dpkg-reconfigure tzdata' if you wish to change it. > + echo > > + exit 0 > (Reading database ... 11230 files and directories currently installed.) > Preparing to replace dmidecode 2.11-9 (using .../dmidecode_2.12-3_amd64.deb) > ... > Unpacking replacement dmidecode ... > Preparing to replace less 444-4 (using .../archives/less_458-3_amd64.deb) ... > + set -e > + exit 0 > Unpacking replacement less ... > + set -e > + which update-mime > Preparing to replace libcr0 0.8.5-2 (using .../libcr0_0.8.5-2.1_amd64.deb) ... > Unpacking replacement libcr0 ... > + set -e > + [ upgrade = remove ] > Preparing to replace blcr-util 0.8.5-2 (using > .../blcr-util_0.8.5-2.1_amd64.deb) ... > Unpacking replacement blcr-util ... > Preparing to replace debfoster 2.7-1.2 (using .../debfoster_2.7-2_amd64.deb) > ... > Unpacking replacement debfoster ... > + [ upgrade = purge ] > + exit 0 > Preparing to replace libblas3gf 1.2.20110419-5 (using > .../libblas3gf_1.2.20110419-10_all.deb) ... > + set -e > + [ upgrade = upgrade ] > + update-alternatives --display libblas.so.3gf > + [ upgrade != upgrade ] > + exit 0 > Unpacking replacement libblas3gf ... > Preparing to replace libint1 1.1.4-1 (using .../libint1_1.1.5-1_amd64.deb) ... > Unpacking replacement libint1 ... > + set -e > + [ upgrade = remove ] > Preparing to replace liblapack3 3.4.1+dfsg-1+deb70u1 (using > .../liblapack3_3.5.0-4_amd64.deb) ... > + set -e > + [ upgrade = upgrade ] > + update-alternatives --display liblapack.so.3gf > + [ upgrade != upgrade ] > + exit 0 > Unpacking replacement liblapack3 ... > + set -e > + [ upgrade = purge ] > Preparing to replace liblapack3gf 3.4.1+dfsg-1+deb70u1 (using > .../liblapack3gf_3.5.0-4_all.deb) ... > + set -e > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/liblapack3gf.prerm > upgrade 3.5.0-4 > + set -e > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + [ upgrade = upgrade ] > + update-alternatives --display liblapack.so.3gf > + [ upgrade != upgrade ] > + exit 0 > Unpacking replacement liblapack3gf ... > Preparing to replace libtorque2 2.4.16+dfsg-1+deb7u3 (using > .../libtorque2_2.4.16+dfsg-1.5_amd64.deb) ... > Unpacking replacement libtorque2 ... > + set -e > + [ upgrade = remove ] > Preparing to replace psi3 3.4.0-4 (using .../psi3_3.4.0-5_amd64.deb) ... > Unpacking replacement psi3 ... > Preparing to replace quantum-espresso-data 5.0-1 (using > .../quantum-espresso-data_5.1+dfsg-3_all.deb) ... > Unpacking replacement quantum-espresso-data ... > Replacing files in old package quantum-espresso ... > Preparing to replace libibverbs1 1.1.6-1 (using > .../libibverbs1_1.1.8-1_amd64.deb) ... > Unpacking replacement libibverbs1 ... > + set -e > + [ upgrade = remove ] > Preparing to replace mpi-default-bin 1.0.1 (using > .../mpi-default-bin_1.0.2+nmu2_amd64.deb) ... > Unpacking replacement mpi-default-bin ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/less.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libcr0.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libibverbs1.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libint1.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/liblapack3.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libtorque2.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/debfoster.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libcr0.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libibverbs1.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libint1.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libtorque2.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/less.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/liblapack3.prerm > Setting up libncursesw5:amd64 (5.9+20140913-1) ... > + set -e > + PACKAGE=libncursesw5 > + dpkg --compare-versions 5.9-10 lt-nl 5.9-7 > + [ configure = configure ] > + ldconfig > + exit 0 > Setting up liblocale-gettext-perl (1.05-8+b1) ... > Setting up libapt-inst1.5:amd64 (1.0.9.3) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up libgc1c2:amd64 (1:7.2d-6.4) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up libnuma1:amd64 (2.0.10-1) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up dmidecode (2.12-3) ... > Setting up less (458-3) ... > + set -e > + update-alternatives --quiet --install /usr/bin/pager pager /bin/less 77 > --slave /usr/share/man/man1/pager.1.gz pager.1.gz > /usr/share/man/man1/less.1.gz > + update-alternatives --quiet --remove pager /usr/bin/less > + [ -e /usr/share/debconf/confmodule ] > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/less.postinst configure > 444-4 > + set -e > + update-alternatives --quiet --install /usr/bin/pager pager /bin/less 77 > --slave /usr/share/man/man1/pager.1.gz pager.1.gz > /usr/share/man/man1/less.1.gz > + update-alternatives --quiet --remove pager /usr/bin/less > + [ -e /usr/share/debconf/confmodule ] > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + db_version 2.0 > + _db_cmd VERSION 2.0 > + _db_internal_IFS= > > + IFS= > + printf %s\n VERSION 2.0 > + IFS= > > + IFS= > read -r _db_internal_line > + RET=2.0 > + return 0 > + db_purge > + _db_cmd PURGE > + _db_internal_IFS= > > + IFS= > + printf %s\n PURGE > + IFS= > > + IFS= > read -r _db_internal_line > + RET=0 > + return 0 > + exit 0 > Setting up libcr0 (0.8.5-2.1) ... > + [ configure = configure ] > + ldconfig > + [ configure = configure ] > + ldconfig > Setting up blcr-util (0.8.5-2.1) ... > Setting up debfoster (2.7-2) ... > Setting up libblas3gf (1.2.20110419-10) ... > Setting up libint1 (1.1.5-1) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up liblapack3 (3.5.0-4) ... > + set -e > + update-alternatives --install /usr/lib/liblapack.so.3 liblapack.so.3 > /usr/lib/lapack/liblapack.so.3 10 --slave /usr/lib/liblapack.so.3gf > liblapack.so.3gf /usr/lib/lapack/liblapack.so.3 > + exit 0 > Setting up liblapack3gf (3.5.0-4) ... > Setting up libtorque2 (2.4.16+dfsg-1.5) ... > + set -e > + [ configure = configure ] > + ldconfig > Setting up psi3 (3.4.0-5) ... > Setting up quantum-espresso-data (5.1+dfsg-3) ... > Setting up libibverbs1 (1.1.8-1) ... > + set -e > + [ configure = configure ] > + getent group rdma > + [ configure = configure ] > + ldconfig > Setting up mpi-default-bin (1.0.2+nmu2) ... > Setting up tasksel-data (3.29) ... > + set -e > + dpkg --compare-versions 3.14.1 lt 3.14 > Setting up tasksel (3.29) ... > + set -e > + . /usr/share/debconf/confmodule > + [ ! ] > + PERL_DL_NONLAZY=1 > + export PERL_DL_NONLAZY > + [ ] > + exec /usr/share/debconf/frontend /var/lib/dpkg/info/tasksel.postinst > configure 3.14.1 > + set -e > + . /usr/share/debconf/confmodule > + [ ! 1 ] > + [ -z ] > + exec > + [ ] > + exec > + DEBCONF_REDIR=1 > + export DEBCONF_REDIR > + [ configure = configure ] > + which update-menus > + [ -x ] > ## Running apt-get -y dist-upgrade... > Reading package lists... > Building dependency tree... > Reading state information... > Starting > Starting 2 > Investigating (0) libopenmpi1.6 [ amd64 ] < none -> 1.6.5-9 > ( libs ) > Broken libopenmpi1.6:amd64 Conflicts on libopenmpi1.3 [ amd64 ] < 1.4.5-1 > ( > libs ) > Considering libopenmpi1.3:amd64 0 as a solution to libopenmpi1.6:amd64 17 > Added libopenmpi1.3:amd64 to the remove list > Broken libopenmpi1.6:amd64 Conflicts on openmpi-libs0 [ amd64 ] < none > ( > none ) > Considering libopenmpi1.3:amd64 0 as a solution to libopenmpi1.6:amd64 17 > Added libopenmpi1.3:amd64 to the remove list > Fixing libopenmpi1.6:amd64 via remove of libopenmpi1.3:amd64 > Fixing libopenmpi1.6:amd64 via remove of libopenmpi1.3:amd64 > Investigating (0) libblacs-openmpi1 [ amd64 ] < none -> 1.1-33 > ( libs ) > Broken libblacs-openmpi1:amd64 Breaks on libblacs-mpi1 [ amd64 ] < 1.1-31 > ( > libs ) (< 1.1-31.2) > Considering libblacs-mpi1:amd64 -1 as a solution to libblacs-openmpi1:amd64 3 > Added libblacs-mpi1:amd64 to the remove list > Fixing libblacs-openmpi1:amd64 via remove of libblacs-mpi1:amd64 > Investigating (0) libscalapack-openmpi1 [ amd64 ] < none -> 1.8.0-12 > ( libs > ) > Broken libscalapack-openmpi1:amd64 Breaks on libscalapack-mpi1 [ amd64 ] < > 1.8.0-9 > ( libs ) (< 1.8.0-9.1) > Considering libscalapack-mpi1:amd64 -2 as a solution to > libscalapack-openmpi1:amd64 2 > Added libscalapack-mpi1:amd64 to the remove list > Fixing libscalapack-openmpi1:amd64 via remove of libscalapack-mpi1:amd64 > Done > The following packages will be REMOVED: > libblacs-mpi1 libopenmpi1.3 libscalapack-mpi1 > The following NEW packages will be installed: > abinit-data aces3-data acl dbus dmsetup file gcc-4.9-base ifupdown init > init-system-helpers iproute2 isc-dhcp-client isc-dhcp-common > libalgorithm-c3-perl libarchive-extract-perl libatm1 libaudit-common > libaudit1 libblacs-openmpi1 libblas-common libcap-ng0 libcap2 libcap2-bin > libcgi-fast-perl libcgi-pm-perl libclass-c3-perl libclass-c3-xs-perl > libcpan-meta-perl libcryptsetup4 libdata-optlist-perl libdata-section-perl > libdb5.3 libdbus-1-3 libdebconfclient0 libdevmapper1.02.1 libdns-export100 > libelpa0 libexpat1 libfcgi-perl libffi6 libfftw3-double3 libfftw3-long3 > libfftw3-single3 libgcrypt20 libgdbm3 libgpg-error0 libhwloc-plugins > libhwloc5 libirs-export91 libisc-export95 libisccfg-export90 libkmod2 > liblog-message-perl liblog-message-simple-perl libltdl7 libmagic1 > libmodule-build-perl libmodule-pluggable-perl libmodule-signature-perl > libmro-compat-perl libopenmpi1.6 libpackage-constants-perl libpam-cap > libpam-systemd libparams-util-perl libpciaccess0 libpcre3 libpod-latex-perl > libpod-readme-perl libprocps3 libpython2.7 libpython2.7-minimal > libpython2.7-stdlib libregexp-common-perl libscalapack-openmpi1 > libsmartcols1 libsoftware-license-perl libsqlite3-0 libssl1.0.0 > libsub-exporter-perl libsub-install-perl libsystemd0 libterm-ui-perl > libtext-soundex-perl libtext-template-perl libudev1 libxc1 libxml2 > libxtables10 mime-support netbase ocl-icd-libopencl1 openmx-data perl > perl-modules procps psmisc rename sgml-base startpar systemd systemd-sysv > udev xml-core > The following packages will be upgraded: > abinit aces3 apt apt-utils base-passwd bsdutils coreutils cp2k cp2k-data > dpkg grep initscripts libapt-pkg4.12 libblas3 libc-bin libfftw3-3 libgcc1 > libgfortran3 libgomp1 libpam-modules libpam-modules-bin libpam0g > libquadmath0 libsc-data libsc7 libselinux1 libsemanage-common libsemanage1 > libstdc++6 login mount mpqc nvi nwchem nwchem-data openmpi-bin > openmpi-checkpoint openmpi-common openmx passwd quantum-espresso sysv-rc > sysvinit sysvinit-utils util-linux > 45 upgraded, 104 newly installed, 3 to remove and 0 not upgraded. > Need to get 242 MB of archives. > After this operation, 709 MB of additional disk space will be used. > Get:1 http://localhost/debian/ jessie/main cp2k amd64 2.5.1-3 [9402 kB] > Get:2 http://localhost/debian/ jessie/main cp2k-data all 2.5.1-3 [17.6 MB] > Get:3 http://localhost/debian/ jessie/main gcc-4.9-base amd64 4.9.1-19 [158 > kB] > Get:4 http://localhost/debian/ jessie/main libgcc1 amd64 1:4.9.1-19 [39.5 kB] > Get:5 http://localhost/debian/ jessie/main libquadmath0 amd64 4.9.1-19 [129 > kB] > Get:6 http://localhost/debian/ jessie/main libgfortran3 amd64 4.9.1-19 [255 > kB] > Get:7 http://localhost/debian/ jessie/main libblas-common amd64 > 1.2.20110419-10 [8496 B] > Get:8 http://localhost/debian/ jessie/main libblas3 amd64 1.2.20110419-10 > [167 kB] > Get:9 http://localhost/debian/ jessie/main libltdl7 amd64 2.4.2-1.11 [45.2 kB] > Get:10 http://localhost/debian/ jessie/main libhwloc5 amd64 1.10.0-3 [86.9 kB] > Get:11 http://localhost/debian/ jessie/main libstdc++6 amd64 4.9.1-19 [273 kB] > Get:12 http://localhost/debian/ jessie/main libsc7 amd64 2.3.1-16 [2383 kB] > Get:13 http://localhost/debian/ jessie/main mpqc amd64 2.3.1-16 [88.1 kB] > Get:14 http://localhost/debian/ jessie/main libsc-data all 2.3.1-16 [121 kB] > Get:15 http://localhost/debian/ jessie/main libelpa0 amd64 2013.11.008-2 > [88.9 kB] > Get:16 http://localhost/debian/ jessie/main libgomp1 amd64 4.9.1-19 [37.8 kB] > Get:17 http://localhost/debian/ jessie/main libfftw3-3 amd64 3.3.4-1.1 [18.6 > kB] > Get:18 http://localhost/debian/ jessie/main libfftw3-long3 amd64 3.3.4-1.1 > [312 kB] > Get:19 http://localhost/debian/ jessie/main libfftw3-single3 amd64 3.3.4-1.1 > [754 kB] > Get:20 http://localhost/debian/ jessie/main libfftw3-double3 amd64 3.3.4-1.1 > [722 kB] > Get:21 http://localhost/debian/ jessie/main libscalapack-openmpi1 amd64 > 1.8.0-12 [2184 kB] > Get:22 http://localhost/debian/ jessie/main quantum-espresso amd64 5.1+dfsg-3 > [10.1 MB] > Get:23 http://localhost/debian/ jessie/main nwchem amd64 6.5+r26243-2 [10.8 > MB] > Get:24 http://localhost/debian/ jessie/main nwchem-data all 6.5+r26243-2 > [5839 kB] > Get:25 http://localhost/debian/ jessie/main libpython2.7-minimal amd64 > 2.7.8-11 [374 kB] > Get:26 http://localhost/debian/ jessie/main mime-support all 3.57 [35.8 kB] > Get:27 http://localhost/debian/ jessie/main libdb5.3 amd64 5.3.28-6 [679 kB] > Get:28 http://localhost/debian/ jessie/main libexpat1 amd64 2.1.0-6+b3 [80.3 > kB] > Get:29 http://localhost/debian/ jessie/main libffi6 amd64 3.1-2 [19.8 kB] > Get:30 http://localhost/debian/ jessie/main libsqlite3-0 amd64 3.8.7.1-1 [438 > kB] > Get:31 http://localhost/debian/ jessie/main libssl1.0.0 amd64 1.0.1j-1 [1032 > kB] > Get:32 http://localhost/debian/ jessie/main libpython2.7-stdlib amd64 > 2.7.8-11 [1841 kB] > Get:33 http://localhost/debian/ jessie/main libpython2.7 amd64 2.7.8-11 [1080 > kB] > Get:34 http://localhost/debian/ jessie/main openmpi-checkpoint amd64 1.6.5-9 > [96.0 kB] > Get:35 http://localhost/debian/ jessie/main openmpi-bin amd64 1.6.5-9 [154 kB] > Get:36 http://localhost/debian/ jessie/main openmpi-common all 1.6.5-9 [111 > kB] > Get:37 http://localhost/debian/ jessie/main aces3-data all 3.0.8-1 [10.4 MB] > Get:38 http://localhost/debian/ jessie/main aces3 amd64 3.0.8-1 [43.7 MB] > Get:39 http://localhost/debian/ jessie/main libopenmpi1.6 amd64 1.6.5-9 [1468 > kB] > Get:40 http://localhost/debian/ jessie/main libblacs-openmpi1 amd64 1.1-33 > [56.8 kB] > Get:41 http://localhost/debian/ jessie/main libxc1 amd64 2.1.0-2 [283 kB] > Get:42 http://localhost/debian/ jessie/main libgpg-error0 amd64 1.17-2 [81.7 > kB] > Get:43 http://localhost/debian/ jessie/main libgcrypt20 amd64 1.6.2-4 [389 kB] > Get:44 http://localhost/debian/ jessie/main libsystemd0 amd64 215-5+b1 [82.3 > kB] > Get:45 http://localhost/debian/ jessie/main bsdutils amd64 1:2.25.2-2 [93.1 > kB] > Get:46 http://localhost/debian/ jessie/main libpcre3 amd64 1:8.35-3.1 [320 kB] > Get:47 http://localhost/debian/ jessie/main libselinux1 amd64 2.3-2 [89.8 kB] > Get:48 http://localhost/debian/ jessie/main coreutils amd64 8.23-3 [2721 kB] > Get:49 http://localhost/debian/ jessie/main dpkg amd64 1.17.21 [2843 kB] > Get:50 http://localhost/debian/ jessie/main grep amd64 2.20-4 [324 kB] > Get:51 http://localhost/debian/ jessie/main libaudit-common all 1:2.4-1 [13.5 > kB] > Get:52 http://localhost/debian/ jessie/main libaudit1 amd64 1:2.4-1 [44.2 kB] > Get:53 http://localhost/debian/ jessie/main libcap2 amd64 1:2.24-6 [15.1 kB] > Get:54 http://localhost/debian/ jessie/main libudev1 amd64 215-5+b1 [49.4 kB] > Get:55 http://localhost/debian/ jessie/main libgdbm3 amd64 1.8.3-13+b1 [30.1 > kB] > Get:56 http://localhost/debian/ jessie/main perl amd64 5.20.1-2 [2611 kB] > Get:57 http://localhost/debian/ jessie/main perl-modules all 5.20.1-2 [2571 > kB] > Get:58 http://localhost/debian/ jessie/main init-system-helpers all 1.21 > [13.9 kB] > Get:59 http://localhost/debian/ jessie/main libsmartcols1 amd64 2.25.2-2 [109 > kB] > Get:60 http://localhost/debian/ jessie/main startpar amd64 0.59-3 [21.8 kB] > Get:61 http://localhost/debian/ jessie/main sysvinit-utils amd64 2.88dsf-57 > [84.5 kB] > Get:62 http://localhost/debian/ jessie/main sysv-rc all 2.88dsf-57 [83.0 kB] > Get:63 http://localhost/debian/ jessie/main mount amd64 2.25.2-2 [167 kB] > Get:64 http://localhost/debian/ jessie/main initscripts amd64 2.88dsf-57 > [87.3 kB] > Get:65 http://localhost/debian/ jessie/main util-linux amd64 2.25.2-2 [844 kB] > Get:66 http://localhost/debian/ jessie/main libdevmapper1.02.1 amd64 > 2:1.02.90-2 [145 kB] > Get:67 http://localhost/debian/ jessie/main dmsetup amd64 2:1.02.90-2 [68.8 > kB] > Get:68 http://localhost/debian/ jessie/main libcryptsetup4 amd64 2:1.6.6-3 > [103 kB] > Get:69 http://localhost/debian/ jessie/main libkmod2 amd64 18-3 [46.2 kB] > Get:70 http://localhost/debian/ jessie/main libprocps3 amd64 2:3.3.9-8 [56.3 > kB] > Get:71 http://localhost/debian/ jessie/main procps amd64 2:3.3.9-8 [235 kB] > Get:72 http://localhost/debian/ jessie/main udev amd64 215-5+b1 [875 kB] > Get:73 http://localhost/debian/ jessie/main acl amd64 2.2.52-2 [58.4 kB] > Get:74 http://localhost/debian/ jessie/main libcap2-bin amd64 1:2.24-6 [25.1 > kB] > Get:75 http://localhost/debian/ jessie/main libpam0g amd64 1.1.8-3.1 [126 kB] > Get:76 http://localhost/debian/ jessie/main systemd amd64 215-5+b1 [2530 kB] > Get:77 http://localhost/debian/ jessie/main systemd-sysv amd64 215-5+b1 [29.1 > kB] > Get:78 http://localhost/debian/ jessie/main init amd64 1.21 [4634 B] > Get:79 http://localhost/debian/ jessie/main libpam-modules-bin amd64 > 1.1.8-3.1 [104 kB] > Get:80 http://localhost/debian/ jessie/main libpam-modules amd64 1.1.8-3.1 > [305 kB] > Get:81 http://localhost/debian/ jessie/main login amd64 1:4.2-2+b2 [718 kB] > Get:82 http://localhost/debian/ jessie/main sysvinit amd64 2.88dsf-57 [99.9 > kB] > Get:83 http://localhost/debian/ jessie/main libapt-pkg4.12 amd64 1.0.9.3 [780 > kB] > Get:84 http://localhost/debian/ jessie/main apt amd64 1.0.9.3 [1100 kB] > Get:85 http://localhost/debian/ jessie/main libdebconfclient0 amd64 0.192 > [46.2 kB] > Get:86 http://localhost/debian/ jessie/main base-passwd amd64 3.5.37 [64.5 kB] > Get:87 http://localhost/debian/ jessie/main libc-bin amd64 2.19-13 [1282 kB] > Get:88 http://localhost/debian/ jessie/main libsemanage-common all 2.3-1 > [24.6 kB] > Get:89 http://localhost/debian/ jessie/main libsemanage1 amd64 2.3-1 [88.2 kB] > Get:90 http://localhost/debian/ jessie/main libmagic1 amd64 1:5.20-2 [243 kB] > Get:91 http://localhost/debian/ jessie/main libxml2 amd64 2.9.1+dfsg1-4 [797 > kB] > Get:92 http://localhost/debian/ jessie/main libatm1 amd64 1:2.5.1-1.5 [73.3 > kB] > Get:93 http://localhost/debian/ jessie/main libcap-ng0 amd64 0.7.4-2 [13.2 kB] > Get:94 http://localhost/debian/ jessie/main libdbus-1-3 amd64 1.8.8-2 [166 kB] > Get:95 http://localhost/debian/ jessie/main libisc-export95 amd64 > 1:9.9.5.dfsg-5 [139 kB] > Get:96 http://localhost/debian/ jessie/main libdns-export100 amd64 > 1:9.9.5.dfsg-5 [454 kB] > Get:97 http://localhost/debian/ jessie/main libisccfg-export90 amd64 > 1:9.9.5.dfsg-5 [39.6 kB] > Get:98 http://localhost/debian/ jessie/main libirs-export91 amd64 > 1:9.9.5.dfsg-5 [37.4 kB] > Get:99 http://localhost/debian/ jessie/main dbus amd64 1.8.8-2 [285 kB] > Get:100 http://localhost/debian/ jessie/main libpam-systemd amd64 215-5+b1 > [118 kB] > Get:101 http://localhost/debian/ jessie/main libpciaccess0 amd64 0.13.2-3 > [47.1 kB] > Get:102 http://localhost/debian/ jessie/main sgml-base all 1.26+nmu4 [14.6 kB] > Get:103 http://localhost/debian/ jessie/main ocl-icd-libopencl1 amd64 2.2.3-1 > [33.5 kB] > Get:104 http://localhost/debian/ jessie/main passwd amd64 1:4.2-2+b2 [956 kB] > Get:105 http://localhost/debian/ jessie/main apt-utils amd64 1.0.9.3 [367 kB] > Get:106 http://localhost/debian/ jessie/main iproute2 amd64 3.16.0-2 [426 kB] > Get:107 http://localhost/debian/ jessie/main ifupdown amd64 0.7.49 [66.5 kB] > Get:108 http://localhost/debian/ jessie/main isc-dhcp-common amd64 4.3.1-5 > [211 kB] > Get:109 http://localhost/debian/ jessie/main isc-dhcp-client amd64 4.3.1-5 > [249 kB] > Get:110 http://localhost/debian/ jessie/main libxtables10 amd64 1.4.21-2+b1 > [67.6 kB] > Get:111 http://localhost/debian/ jessie/main netbase all 5.3 [19.0 kB] > Get:112 http://localhost/debian/ jessie/main file amd64 1:5.20-2 [58.3 kB] > Get:113 http://localhost/debian/ jessie/main abinit-data all 7.8.2-2 [11.9 MB] > Get:114 http://localhost/debian/ jessie/main libalgorithm-c3-perl all 0.09-1 > [11.9 kB] > Get:115 http://localhost/debian/ jessie/main libarchive-extract-perl all > 0.72-1 [24.8 kB] > Get:116 http://localhost/debian/ jessie/main libcgi-pm-perl all 4.09-1 [213 > kB] > Get:117 http://localhost/debian/ jessie/main libfcgi-perl amd64 0.77-1+b1 > [39.1 kB] > Get:118 http://localhost/debian/ jessie/main libcgi-fast-perl all 1:2.04-1 > [10.9 kB] > Get:119 http://localhost/debian/ jessie/main libclass-c3-perl all 0.26-1 > [22.9 kB] > Get:120 http://localhost/debian/ jessie/main libclass-c3-xs-perl amd64 > 0.13-2+b1 [15.2 kB] > Get:121 http://localhost/debian/ jessie/main libcpan-meta-perl all 2.142690-1 > [125 kB] > Get:122 http://localhost/debian/ jessie/main libparams-util-perl amd64 > 1.07-2+b1 [23.5 kB] > Get:123 http://localhost/debian/ jessie/main libsub-install-perl all 0.928-1 > [11.4 kB] > Get:124 http://localhost/debian/ jessie/main libdata-optlist-perl all 0.109-1 > [10.6 kB] > Get:125 http://localhost/debian/ jessie/main libmro-compat-perl all 0.12-1 > [13.2 kB] > Get:126 http://localhost/debian/ jessie/main libsub-exporter-perl all 0.986-1 > [49.9 kB] > Get:127 http://localhost/debian/ jessie/main libdata-section-perl all > 0.200006-1 [13.4 kB] > Get:128 http://localhost/debian/ jessie/main liblog-message-perl all 0.8-1 > [26.0 kB] > Get:129 http://localhost/debian/ jessie/main liblog-message-simple-perl all > 0.10-2 [8126 B] > Get:130 http://localhost/debian/ jessie/main libmodule-build-perl all > 0.421000-2 [265 kB] > Get:131 http://localhost/debian/ jessie/main libmodule-pluggable-perl all > 5.1-1 [25.0 kB] > Get:132 http://localhost/debian/ jessie/main libmodule-signature-perl all > 0.73-1 [31.6 kB] > Get:133 http://localhost/debian/ jessie/main libpackage-constants-perl all > 0.04-1 [5820 B] > Get:134 http://localhost/debian/ jessie/main libpam-cap amd64 1:2.24-6 [12.3 > kB] > Get:135 http://localhost/debian/ jessie/main libpod-latex-perl all 0.61-1 > [34.7 kB] > Get:136 http://localhost/debian/ jessie/main libregexp-common-perl all > 2013031301-1 [173 kB] > Get:137 http://localhost/debian/ jessie/main libpod-readme-perl all 0.11-1 > [15.3 kB] > Get:138 http://localhost/debian/ jessie/main libtext-template-perl all 1.46-1 > [53.1 kB] > Get:139 http://localhost/debian/ jessie/main libsoftware-license-perl all > 0.103010-3 [119 kB] > Get:140 http://localhost/debian/ jessie/main libterm-ui-perl all 0.42-1 [19.1 > kB] > Get:141 http://localhost/debian/ jessie/main libtext-soundex-perl amd64 > 3.4-1+b2 [13.7 kB] > Get:142 http://localhost/debian/ jessie/main nvi amd64 1.81.6-11+b1 [247 kB] > Get:143 http://localhost/debian/ jessie/main psmisc amd64 22.21-2 [119 kB] > Get:144 http://localhost/debian/ jessie/main rename all 0.20-3 [12.4 kB] > Get:145 http://localhost/debian/ jessie/main xml-core all 0.13+nmu2 [24.2 kB] > Get:146 http://localhost/debian/ jessie/main abinit amd64 7.8.2-2 [7328 kB] > Get:147 http://localhost/debian/ jessie/main libhwloc-plugins amd64 1.10.0-3 > [15.2 kB] > Get:148 http://localhost/debian/ jessie/main openmx amd64 3.7.6-1 [909 kB] > Get:149 http://localhost/debian/ jessie/main openmx-data all 3.7.6-1 [69.0 MB] > Extracting templates from packages: 20% Extracting templates from packages: 40% Extracting templates from packages: 60% Extracting templates from packages: 80% Extracting templates from packages: 100% > Preconfiguring packages ... > Fetched 242 MB in 7s (30.5 MB/s) > (Reading database ... 11268 files and directories currently installed.) > Preparing to replace cp2k 2.2.426-8 (using .../cp2k_2.5.1-3_amd64.deb) ... > Unpacking replacement cp2k ... > Preparing to replace cp2k-data 2.2.426-8 (using > .../cp2k-data_2.5.1-3_all.deb) ... > Unpacking replacement cp2k-data ... > Selecting previously unselected package gcc-4.9-base:amd64. > Unpacking gcc-4.9-base:amd64 (from .../gcc-4.9-base_4.9.1-19_amd64.deb) ... > Setting up gcc-4.9-base:amd64 (4.9.1-19) ... > (Reading database ... 11757 files and directories currently installed.) > Preparing to replace libgcc1:amd64 1:4.7.2-5 (using > .../libgcc1_1%3a4.9.1-19_amd64.deb) ... > Unpacking replacement libgcc1:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libgcc1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libgcc1:amd64.postrm > Setting up libgcc1:amd64 (1:4.9.1-19) ... > + docdir=/usr/share/doc/libgcc1 > + [ -d /usr/share/doc/libgcc1 ] > + [ ! -h /usr/share/doc/libgcc1 ] > + [ configure = configure ] > + ldconfig > (Reading database ... 11757 files and directories currently installed.) > Preparing to replace libquadmath0:amd64 4.7.2-5 (using > .../libquadmath0_4.9.1-19_amd64.deb) ... > Unpacking replacement libquadmath0:amd64 ... > + set -e > + [ upgrade = remove ] > Preparing to replace libgfortran3:amd64 4.7.2-5 (using > .../libgfortran3_4.9.1-19_amd64.deb) ... > Unpacking replacement libgfortran3:amd64 ... > + set -e > + [ upgrade = remove ] > Selecting previously unselected package libblas-common. > Unpacking libblas-common (from .../libblas-common_1.2.20110419-10_amd64.deb) > ... > Preparing to replace libblas3 1.2.20110419-5 (using > .../libblas3_1.2.20110419-10_amd64.deb) ... > + set -e > + [ upgrade = upgrade ] > + update-alternatives --display libblas.so.3gf > + [ upgrade != upgrade ] > + exit 0 > Unpacking replacement libblas3 ... > Selecting previously unselected package libltdl7:amd64. > Unpacking libltdl7:amd64 (from .../libltdl7_2.4.2-1.11_amd64.deb) ... > Selecting previously unselected package libhwloc5:amd64. > Unpacking libhwloc5:amd64 (from .../libhwloc5_1.10.0-3_amd64.deb) ... > Preparing to replace libstdc++6:amd64 4.7.2-5 (using > .../libstdc++6_4.9.1-19_amd64.deb) ... > Unpacking replacement libstdc++6:amd64 ... > + set -e > + [ upgrade = remove ] > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libblas3.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libgfortran3:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libhwloc5:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libltdl7:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libquadmath0:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libstdc++6:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libgfortran3:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libhwloc5:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libltdl7:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libquadmath0:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libstdc++6:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libblas3.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libstdc++6:amd64.prerm > Setting up libstdc++6:amd64 (4.9.1-19) ... > + docdir=/usr/share/doc/libstdc++6 > + [ -d /usr/share/doc/libstdc++6 ] > + [ ! -h /usr/share/doc/libstdc++6 ] > + [ configure = configure ] > + ldconfig > (Reading database ... 11790 files and directories currently installed.) > Preparing to replace libsc7 2.3.1-14 (using .../libsc7_2.3.1-16_amd64.deb) ... > Unpacking replacement libsc7 ... > + set -e > + [ upgrade = remove ] > Preparing to replace mpqc 2.3.1-14 (using .../mpqc_2.3.1-16_amd64.deb) ... > Unpacking replacement mpqc ... > Preparing to replace libsc-data 2.3.1-14 (using > .../libsc-data_2.3.1-16_all.deb) ... > Unpacking replacement libsc-data ... > Selecting previously unselected package libelpa0. > Unpacking libelpa0 (from .../libelpa0_2013.11.008-2_amd64.deb) ... > Preparing to replace libgomp1:amd64 4.7.2-5 (using > .../libgomp1_4.9.1-19_amd64.deb) ... > Unpacking replacement libgomp1:amd64 ... > + set -e > + [ upgrade = remove ] > Preparing to replace libfftw3-3:amd64 3.3.2-3.1 (using > .../libfftw3-3_3.3.4-1.1_amd64.deb) ... > Unpacking replacement libfftw3-3:amd64 ... > + set -e > + [ upgrade = remove ] > Selecting previously unselected package libfftw3-long3:amd64. > Unpacking libfftw3-long3:amd64 (from .../libfftw3-long3_3.3.4-1.1_amd64.deb) > ... > Selecting previously unselected package libfftw3-single3:amd64. > Unpacking libfftw3-single3:amd64 (from > .../libfftw3-single3_3.3.4-1.1_amd64.deb) ... > Selecting previously unselected package libfftw3-double3:amd64. > Unpacking libfftw3-double3:amd64 (from > .../libfftw3-double3_3.3.4-1.1_amd64.deb) ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libelpa0.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libfftw3-double3:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libfftw3-long3:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libfftw3-single3:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libgomp1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libsc7.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libelpa0.postrm > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libfftw3-double3:amd64.postrm > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libfftw3-long3:amd64.postrm > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libfftw3-single3:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libgomp1:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libsc7.postrm > (Reading database ... 11812 files and directories currently installed.) > Removing libscalapack-mpi1 ... > + set -e > + [ remove = remove ] > + ldconfig > Selecting previously unselected package libscalapack-openmpi1. > (Reading database ... 11806 files and directories currently installed.) > Unpacking libscalapack-openmpi1 (from > .../libscalapack-openmpi1_1.8.0-12_amd64.deb) ... > Preparing to replace quantum-espresso 5.0-1 (using > .../quantum-espresso_5.1+dfsg-3_amd64.deb) ... > Unpacking replacement quantum-espresso ... > Preparing to replace nwchem 6.1-6 (using .../nwchem_6.5+r26243-2_amd64.deb) > ... > Unpacking replacement nwchem ... > Preparing to replace nwchem-data 6.1-6 (using > .../nwchem-data_6.5+r26243-2_all.deb) ... > Unpacking replacement nwchem-data ... > Selecting previously unselected package libpython2.7-minimal:amd64. > Unpacking libpython2.7-minimal:amd64 (from > .../libpython2.7-minimal_2.7.8-11_amd64.deb) ... > Selecting previously unselected package mime-support. > Unpacking mime-support (from .../mime-support_3.57_all.deb) ... > Selecting previously unselected package libdb5.3:amd64. > Unpacking libdb5.3:amd64 (from .../libdb5.3_5.3.28-6_amd64.deb) ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libdb5.3:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libpython2.7-minimal:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libscalapack-openmpi1.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/mime-support.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libdb5.3:amd64.postrm > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libpython2.7-minimal:amd64.postrm > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libscalapack-openmpi1.postrm > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libpython2.7-minimal:amd64.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/mime-support.prerm > Setting up libdb5.3:amd64 (5.3.28-6) ... > + set -e > + [ configure = configure ] > + ldconfig > Selecting previously unselected package libexpat1:amd64. > (Reading database ... 12205 files and directories currently installed.) > Unpacking libexpat1:amd64 (from .../libexpat1_2.1.0-6+b3_amd64.deb) ... > Selecting previously unselected package libffi6:amd64. > Unpacking libffi6:amd64 (from .../libffi6_3.1-2_amd64.deb) ... > Selecting previously unselected package libsqlite3-0:amd64. > Unpacking libsqlite3-0:amd64 (from .../libsqlite3-0_3.8.7.1-1_amd64.deb) ... > Selecting previously unselected package libssl1.0.0:amd64. > Unpacking libssl1.0.0:amd64 (from .../libssl1.0.0_1.0.1j-1_amd64.deb) ... > Selecting previously unselected package libpython2.7-stdlib:amd64. > Unpacking libpython2.7-stdlib:amd64 (from > .../libpython2.7-stdlib_2.7.8-11_amd64.deb) ... > Selecting previously unselected package libpython2.7:amd64. > Unpacking libpython2.7:amd64 (from .../libpython2.7_2.7.8-11_amd64.deb) ... > Preparing to replace openmpi-checkpoint 1.4.5-1 (using > .../openmpi-checkpoint_1.6.5-9_amd64.deb) ... > Unpacking replacement openmpi-checkpoint ... > Preparing to replace openmpi-bin 1.4.5-1 (using > .../openmpi-bin_1.6.5-9_amd64.deb) ... > + set -e > + [ upgrade != upgrade ] > + exit 0 > Unpacking replacement openmpi-bin ... > Preparing to replace openmpi-common 1.4.5-1 (using > .../openmpi-common_1.6.5-9_all.deb) ... > Unpacking replacement openmpi-common ... > Selecting previously unselected package aces3-data. > Unpacking aces3-data (from .../aces3-data_3.0.8-1_all.deb) ... > dpkg: error processing /var/cache/apt/archives/aces3-data_3.0.8-1_all.deb > (--unpack): > trying to overwrite '/usr/share/aces3/GENBAS', which is also in package aces3 > 3.0.6-7 > dpkg-deb: error: subprocess paste was killed by signal (Broken pipe) > Preparing to replace aces3 3.0.6-7 (using .../aces3_3.0.8-1_amd64.deb) ... > Unpacking replacement aces3 ... > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libexpat1:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libffi6:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libpython2.7:amd64.postinst > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libsqlite3-0:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libssl1.0.0:amd64.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/openmpi-bin.postinst > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libexpat1:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libffi6:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libpython2.7:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libsqlite3-0:amd64.postrm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/libssl1.0.0:amd64.postrm > Dpkg hook: enabling sh trace for > /var/lib/dpkg/info/libpython2.7-stdlib:amd64.prerm > Dpkg hook: enabling sh trace for /var/lib/dpkg/info/openmpi-bin.prerm > Errors were encountered while processing: > /var/cache/apt/archives/aces3-data_3.0.8-1_all.deb > E: Sub-process /usr/bin/dpkg returned an error code (1) The full build log is available from: http://aws-logs.debian.net/ftbfs-logs/2014/11/14/debichem-abinitio.log It is reproducible by installing your package in a clean chroot, using the debconf Noninteractive frontend, and priority: critical. This looks like a bug in aces3 or aces3-data. However, both aces3 and aces3-data can be upgraded safely (ie. the test for them succeed). It also only occurs when testing debichem-abinitio. Hence the bug against that package. Lucas -- To UNSUBSCRIBE, email to debian-bugs-rc-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
