Your message dated Sun, 04 Aug 2013 19:18:15 +0000
with message-id <e1v63ol-0007tl...@franck.debian.org>
and subject line Bug#718689: fixed in indigo 1.1.11-2
has caused the Debian Bug report #718689,
regarding indigo: FTBFS on arm*, ia64, mips*, s390: cc: error: unrecognized 
command line option '-m32'/'-m64'
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
718689: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=718689
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: indigo
Version: 1.1.11-1
Severity: serious
Justification: FTBFS but built successfully in the past

indigo now fails to build from source on arm*, mips*, ia64 and s390 with
(from the armel build log):
| make[4]: Entering directory `/«PKGBUILDDIR»/build_scripts/indigo-utils'
| /usr/bin/cmake -E cmake_progress_report 
/«PKGBUILDDIR»/build_scripts/indigo-utils/CMakeFiles 
| [  0%] Building C object 
indigo/common/CMakeFiles/common.dir/base_c/os_tls_posix.c.o
| cd /«PKGBUILDDIR»/build_scripts/indigo-utils/indigo/common && /usr/bin/cc   
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat 
-Werror=format-security -D_FORTIFY_SOURCE=2  -m32 -m32 -I/«PKGBUILDDIR»/common  
   -fvisibility=hidden -fPIC -fvisibility=hidden -fPIC -fvisibility=hidden 
-fPIC -o CMakeFiles/common.dir/base_c/os_tls_posix.c.o   -c 
/«PKGBUILDDIR»/common/base_c/os_tls_posix.c
| cc: error: unrecognized command line option '-m32'
| cc: error: unrecognized command line option '-m32'
| make[4]: *** [indigo/common/CMakeFiles/common.dir/base_c/os_tls_posix.c.o] 
Error 1
| make[4]: Leaving directory `/«PKGBUILDDIR»/build_scripts/indigo-utils'
| make[3]: *** [indigo/common/CMakeFiles/common.dir/all] Error 2
| make[2]: *** [all] Error 2
| make[1]: *** [override_dh_auto_build] Error 2
| make: *** [build-arch] Error 2
| dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2

On ia64 it fails with -m64 instead. This error is probably due to the
very incomplete architecture detection code in
common/cmake/GetSystemVersion.cmake:
| ELSEIF(UNIX)
|   set(SYSTEM_NAME "Linux")
|   if (NOT SUBSYSTEM_NAME)
|     IF(CMAKE_SIZEOF_VOID_P MATCHES 8)
|       set(SUBSYSTEM_NAME "x64")
|     ELSE()
|       set(SUBSYSTEM_NAME "x86")
|     ENDIF()
|   endif()
|   SET(SYSTEM_DL_EXTENSION ".so")
and then in common/cmake/SetBuildParameters.cmake:
| if(UNIX AND NOT APPLE)
|   if (SUBSYSTEM_NAME MATCHES "x86")
|     set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -m32")
|     set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -m32")
|   elseif(SUBSYSTEM_NAME MATCHES "x64")
|     set(CMAKE_C_FLAGS "-include 
${CMAKE_CURRENT_LIST_DIR}/../hacks/gcc_preinclude.h ${CMAKE_C_FLAGS} -m64")
|     set(CMAKE_CXX_FLAGS "-include 
${CMAKE_CURRENT_LIST_DIR}/../hacks/gcc_preinclude.h ${CMAKE_CXX_FLAGS} -m64")
|   endif()
| endif()

Regards
-- 
Sebastian Ramacher

Attachment: signature.asc
Description: Digital signature


--- End Message ---
--- Begin Message ---
Source: indigo
Source-Version: 1.1.11-2

We believe that the bug you reported is fixed in the latest version of
indigo, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 718...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Daniel Leidert <dleid...@debian.org> (supplier of updated indigo package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sun, 04 Aug 2013 20:56:28 +0200
Source: indigo
Binary: indigo-utils libindigo0d libindigo-dev python-indigo libindigo-java
Architecture: source amd64 all
Version: 1.1.11-2
Distribution: unstable
Urgency: low
Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org>
Changed-By: Daniel Leidert <dleid...@debian.org>
Description: 
 indigo-utils - Organic Chemistry Toolkit Utilities
 libindigo-dev - Organic Chemistry Toolkit (development files)
 libindigo-java - Organic Chemistry Toolkit (Java package)
 libindigo0d - Organic Chemistry Toolkit
 python-indigo - Organic Chemistry Toolkit (Python module)
Closes: 718689
Changes: 
 indigo (1.1.11-2) unstable; urgency=low
 .
   [ Daniel Leidert ]
   * debian/javabuild, debian/libindigo-java.jlibs, debian/rules: Removed
     upstream version from jars - handled by javahelper itself.
   * debian/patches/718689_gcc_architecture_flags.patch: Added.
     - Only apply GCC flags -m32/-m64 to architectures which support them
       and don't include the GCC hack on kfreebsd-amd64 (closes: #718689.
   * debian/patches/series: Adjusted.
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Files: 
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--- End Message ---

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