Source: tophat Version: 2.0.8b-1 Severity: serious Tags: jessie sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20130509 qa-ftbfs Justification: FTBFS on amd64
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part: > g++ -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wuninitialized -O3 -g -O2 > -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security > -DNDEBUG -I/usr/include -I./SeqAn-1.3 -Wl,-z,relro -Wl,-z,relro -o > prep_reads prep_reads.o ../src/libtophat.a -lbam -lz > /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/libbam.a(bgzf.o): In > function `bgzf_mt': > (.text+0x1732): undefined reference to `pthread_create' > /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/libbam.a(bgzf.o): In > function `bgzf_close': > (.text+0x1afa): undefined reference to `pthread_join' > collect2: error: ld returned 1 exit status The full build log is available from: http://people.debian.org/~lucas/logs/2013/05/09/tophat_2.0.8b-1_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures. -- To UNSUBSCRIBE, email to debian-bugs-rc-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
