Package: ruby-bio Version: 1.4.1-2 Severity: serious Justification: fails to build from source
Hello,
Two tests failed, causing the package to FTBFS:
1) Failure:
test_esearch_retmax_retstart(Bio::FuncTestPubmedClassMethod)
[./test/functional/bio/io/test_pubmed.rb:61]:
The failure may be caused by changes of NCBI PubMed.
<["21920989",
"21921034",
"21921041",
"21921046",
"21921327",
"21921675",
"21922137",
"21922275",
"21922390",
"21922647"]> expected but was
<["21903324",
"21903368",
"21903579",
"21903592",
"21903770",
"21904072",
"21904608",
"21904639",
"21904657",
"21904777"]>.
2) Failure:
test_randomize_with_hash_equiprobability(Bio::TestSequenceCommon::TestSequenceCommonRandomize)
[./test/unit/bio/sequence/test_common.rb:286:in
`randomize_equiprobability'
./test/unit/bio/sequence/test_common.rb:296:in
`test_randomize_with_hash_equiprobability']:
test of chi2 < 21.666 failed (25.0).
<21.666> expected to be
>
<25.0>.
3127 tests, 20469 assertions, 2 failures, 0 errors
Full build log attached.
Laurent.
ruby-bio.log.xz
Description: Binary data
