Ok, This is fixed in the latest cdo version(s): cdo depends on libhdf5-7 (only), which is provided by either the serial or parallel MPI versions.
A fuller fix is to port this change to stable-proposed-updates and backports. It is a trivial and well tested fix. Also, libgdal1-dev should work with either serial or parallel HDF5. The reason for the dependency was that cdo uses the libcdi library for I/O, which should do parallel writes. This was not actually the case for 1.5.4 version anyway: support was present in the configure and build scripts, but the actual code was not configured for parallel writes (yet). Best regards Alastair On 19/06/2013 22:51, David Bronaugh wrote: > Package: cdo > Version: 1.5.4+dfsg.1-5 > Severity: important > > Dear Maintainer, > cdo and libgdal1-dev cannot be installed together because they have mutually > exclusive dependencies. This is obviously a fairly serious problem. > > My proposed solution is to make cdo depend on libhdf5-dev instead of > libhdf5-openmpi-dev; is there any reason why it depends on > libhdf5-openmpi-dev? > > Thanks for your attention to this. > > -- System Information: > Debian Release: 7.0 > APT prefers stable-updates > APT policy: (500, 'stable-updates'), (500, 'stable'), (1, 'experimental') > Architecture: amd64 (x86_64) > > Kernel: Linux 3.9.1 (SMP w/16 CPU cores) > Locale: LANG=en_CA.UTF-8, LC_CTYPE=en_CA.UTF-8 (charmap=UTF-8) > Shell: /bin/sh linked to /bin/dash > > Versions of packages cdo depends on: > ii libc6 2.17-2 > ii libcdi0 1.5.4+dfsg.1-5 > ii libhdf5-openmpi-7 1.8.8-9 > ii libnetcdfc7 1:4.1.3-6+b1 > ii libproj0 4.7.0-2 > > cdo recommends no packages. > > cdo suggests no packages. > > -- no debconf information -- Alastair McKinstry , <alast...@sceal.ie> , <mckins...@debian.org> http://blog.sceal.ie Anyone who believes exponential growth can go on forever in a finite world is either a madman or an economist - Kenneth Boulter, Economist. -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
