> There's also my PVM version of 2.3.2 from 2003/2004 I ought to clarify that slightly. Sean Eddy's original code had a PVM mode. My variant retained the original but defaults to a new "database sliced" mode - where each query runs on every node against a fraction of the database. (Similar to what Joe's MPI-BLAST and my PVM parallel BLAST do.) To support that hmmfetch was also modified to work over PVM, which wasn't required in SE's original since the master node always had a complete database, so there was no need to fetch entries back from the database slices on the compute nodes.
Now back to your regularly scheduled topics... Regards, David Mathog [EMAIL PROTECTED] Manager, Sequence Analysis Facility, Biology Division, Caltech _______________________________________________ Beowulf mailing list, Beowulf@beowulf.org To change your subscription (digest mode or unsubscribe) visit http://www.beowulf.org/mailman/listinfo/beowulf
