Chris Samuel wrote:
On Thursday 04 January 2007 04:27, David Mathog wrote:
Joe and I aparently exist in parallel software universes ;-).
Being MPI means it can take advantage of high speed interconnects (e.g.
building it with MPICH-GM to use native Myrinet). Of course whether that
would benefit HMMER is something I don't know!
It does. The code does very nicely with low latency (and low OS
jitter). XD1's, while discontinued, are sweet boxes.
--
Joseph Landman, Ph.D
Founder and CEO
Scalable Informatics LLC,
email: [EMAIL PROTECTED]
web : http://www.scalableinformatics.com
phone: +1 734 786 8423
fax : +1 734 786 8452
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