Hi Markus, Yes, that's a shame I can't have country and "nub" together. There is any hope about it?
Eduardo -------------------------------- *Eduardo Dalcin <https://mailtrack.io/trace/link/bac23864202354f3789938ce352a878faa0cd8b8?url=http%3A%2F%2Feduardo.dalc.in&signature=aea58ef6f439535b>* Instituto de Pesquisas Jardim Bot?nico do Rio de Janeiro - JBRJ e-mail: edalcin at jbrj.gov.br Trabalho / Work: +55 21 3204 2116 -------------------------------- *e-mail alternativo / * *alternate email:** edalcin at jbrj.org <edalcin at jbrj.org>* -------------------------------- Agendar reuni?o / Schedule a meeting: http://agendar.dalc.in <https://mailtrack.io/trace/link/db57b837be515d4b7caefe43d55b60467cd7c2c1?url=http%3A%2F%2Fagendar.dalc.in&signature=69b244942739c0f5> On Thu, Sep 3, 2015 at 4:29 PM, Markus D?ring <mdoering at gbif.org> wrote: > Eduardo, > > as you might have seen from my issue comment the webservice uses a > different parameter name for taxonKey which is a bug we need to fix at some > point. > Please use nubKey for now to use the service like that: > > http://api.gbif.org/v1/occurrence/counts/datasets?nubKey=6 > > The real problem for you will be that we do not support the combination of > the country and the taxon filter, just one of the two. So you cannot search > for plants in Brazil I am afraid, just for datasets about Brazil and > datasets with plant records. > > Markus > > > > > On 03 Sep 2015, at 14:12, Eduardo Dalcin <edalcin at jbrj.org> wrote: > > > > Thanks Jan. I'll keep exploring and I'll be in touch, if I need. > > > > Best, > > > > Eduardo > > > > > > > > -------------------------------- > > Eduardo Dalcin > > Instituto de Pesquisas Jardim Bot?nico do Rio de Janeiro - JBRJ > > e-mail: edalcin at jbrj.gov.br > > Trabalho / Work: +55 21 3204 2116 > > -------------------------------- > > e-mail alternativo / alternate email: edalcin at jbrj.org > > -------------------------------- > > Agendar reuni?o / Schedule a meeting: http://agendar.dalc.in > <https://mailtrack.io/trace/link/db57b837be515d4b7caefe43d55b60467cd7c2c1?url=http%3A%2F%2Fagendar.dalc.in&signature=69b244942739c0f5> > > > > On Thu, Sep 3, 2015 at 4:51 AM, Jan Legind [GBIF] <jlegind at gbif.org> > wrote: > > Dear Eduardo, > > > > > > > > Thanks for getting in touch with us about these issues. > > > > > > > > The first request > http://api.gbif.org/v1/occurrence/count?country=BR&taxonKey=6&basisOfRecord=PRESERVED_SPECIMEN > returns the number of records located in Brazil for the facets in the > request. > > > > The second query > http://api.gbif.org/v1/occurrence/counts/datasets?country=BR&taxonKey=6&basisOfRecord=PRESERVED_SPECIMEN > uses the Occurrence Inventories web service > http://www.gbif.org/developer/occurrence#inventories which does not > support the basis-of-record facet in the /datasets request. I understand > that it would be better if the API response yielded an error message in > this instance. > > > > > > > > Concerning the other issues ? you are indeed right that the counts do > not make sense in the context of taxon key 6 which is Plantae. Actually the > API does not handle the taxonKey search at all, contrary to what the > documentation states: > > > > > > > > /occurrence/counts/datasets > > > > GET > > > > Counts > > > > Lists occurrence counts for datasets that cover a given taxon or country. > > > > country, taxonKey > > > > > > > > As you can see here, > http://api.gbif.org/v1/occurrence/counts/datasets?taxonKey=6 , this > request doesn?t return anything. > > > > > > > > The GBIF developers will handle this issue in due time. > > > > You can follow the issue in our bug tracking service here: > http://dev.gbif.org/issues/browse/POR-2828 > > > > > > > > > > > > With best regards, > > > > > > > > Jan K. Legind > > > > Data manager, GBIF Secretariat > > > > > > > > > > > > From: API-users [mailto:api-users-bounces at lists.gbif.org] On Behalf Of > Eduardo Dalcin > > Sent: 2. september 2015 20:06 > > To: api-users at lists.gbif.org; dev at gbif.org > > Cc: Jo?o Monnerat Lanna; Nat?lia Queiroz; Diogo Silva; Laura; Ricardo > Avancini > > Subject: [API-users] Some questions from a begginer > > > > > > > > Hi folks, > > > > > > > > This is my first message to the list. So, please, be nice :) > > > > > > > > I'm working here at Rio de Janeiro Botanical Garden, together with the > guys at the National Center for Flora Conservation. We are doing the risk > assessment of the Brazilian flora to the government. We assess, so far, the > risk of ca. 6.000 species, but we still have to assess ca. 35.000. Access > occurrence records for Brazil is crucial, and every occurrence is important. > > > > > > > > That means that we have to put together occurrence data from different > sources and, after the first batch of the risk assessment, we realize that > we need to build up our aggregator. We are planning to do this with the > Lontra-harvester, with the help of the guys at Brazilian GBIF Node. > > > > > > > > So, the one of the firsts steps was to list the available resources to > understand the dimension of the task and, that brings me to my questions. > > > > > > > > First: > > > > > > > > The request: > > > > > > > > > http://api.gbif.org/v1/occurrence/count?country=BR&taxonKey=6&basisOfRecord=PRESERVED_SPECIMEN > > > > > > > > returns 4.982.689 records > > > > > > > > And the request: > > > > > > > > > http://api.gbif.org/v1/occurrence/counts/datasets?country=BR&taxonKey=6&basisOfRecord=PRESERVED_SPECIMEN > > > > > > > > returns (here) 7.406.310 records > > > > > > > > Comments? > > > > > > > > Second: > > > > > > > > The request: > > > > > > > > > http://api.gbif.org/v1/occurrence/count?country=BR&taxonKey=6&basisOfRecord=PRESERVED_SPECIMEN > > > > > > > > return things like this: > > > > > > > > "197908d0-5565-11d8-b290-b8a03c50a862":27629 > > > > > > But the consult of the same dataset: > > > > > > > > > http://www.gbif.org/occurrence/search?TAXON_KEY=6&DATASET_KEY=197908d0-5565-11d8-b290-b8a03c50a862 > > > > > > > > Returns "null" (of course, is a FishBase!) > > > > > > > > I have plenty of examples like this, on yellow here (not finished!): > > > > > > > > > https://docs.google.com/spreadsheets/d/1msUjwMLoKwnXxJFzF20SeN_C65RIkGLbwaYyj459VTc/edit?usp=sharing > > > > > > > > Comments? > > > > > > > > I think those two questions is a good start. Please, let me know if I'm > doing something wrong. > > > > > > > > Cheers, > > > > > > > > Eduardo > > > > -------------------------------- > > > > Eduardo Dalcin > > > > Instituto de Pesquisas Jardim Bot?nico do Rio de Janeiro - JBRJ > > > > e-mail: edalcin at jbrj.gov.br > > > > Trabalho / Work: +55 21 3204 2116 > > > > -------------------------------- > > > > e-mail alternativo / alternate email: edalcin at jbrj.org > > > > -------------------------------- > > > > Agendar reuni?o / Schedule a meeting: http://agendar.dalc.in > <https://mailtrack.io/trace/link/db57b837be515d4b7caefe43d55b60467cd7c2c1?url=http%3A%2F%2Fagendar.dalc.in&signature=69b244942739c0f5> > > > > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: <http://lists.gbif.org/pipermail/api-users/attachments/20150904/bb5c6c92/attachment-0001.html>
