Hi all,

I know what happens. With that query i am requesting a massive amount of information. The solution is to restrict the query, otherwise the query performance is not efficient.

Regards,
Núria

On 10/22/2014 11:13 AM, Nuria Queralt Rosinach wrote:
Hi,

I forgot the slash in the end of the disgenet endpoint URI... sorry.

Ok, i corrected the endpoint URI in both queries and i repeated their execution in [1].

1) Query restricting to cross both databases for only one protein works, so the query is correct:

Live results: http://linkeddata.uriburner.com/c/9CV36KIP

2) Query unrestricted doesn't work since a timeout message appears:

Live results: http://linkeddata.uriburner.com/c/9SJU7

Is there a solution for that issue? Many thanks in advance.


Best,
Núria


[1] http://linkeddata.uriburner.com/sparql

On 10/22/2014 04:45 AM, Hugh Williams wrote:
Hi Núria,

The http://rdf.disgenet.org/sparql endpoint does not appear accessible:


  Not Found

The requested URL /sparql was not found on this server.

------------------------------------------------------------------------
Apache/2.2.8 (Unix) PHP/5.3.27 mod_python/3.3.1 Python/2.6.6 proxy_html/3.1.2 Server at rdf.disgenet.org <http://rdf.disgenet.org> Port 80


Best Regards
Hugh Williams
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On 21 Oct 2014, at 13:35, Nuria Queralt Rosinach <nquer...@imim.es <mailto:nquer...@imim.es>> wrote:

Hi all,

I am trying to perform a federated query between DisGeNET and
Bio2RDF::irefindex. From [1] the following query works restricted for an
specific protein (http://bio2rdf.org/uniprot:P01008):

Live results: http://linkeddata.uriburner.com/c/9C7XVTFK

But, it does not from the URI Burner [2]:

Live results: http://linkeddata.uriburner.com/c/9DUV2KDP

When i perform the query without protein restrictions, it does not work
neither in [1] nor in [2]:

Live results in [1]: http://linkeddata.uriburner.com/c/9CXT7S3B

Live results in [2]: http://linkeddata.uriburner.com/c/9726JP7

I would like to be able to perform the second FED (not restricted) from
the DisGeNET sparql endpoint. Any hint on that issue? Many thanks in
advance,

Best,
Núria


[1] http://rdf.disgenet.org/sparql
[2] http://linkeddata.uriburner.com/sparql

--
********************************************************************
Núria Queralt Rosinach
Research Programme on Biomedical Informatics (GRIB)
Department of Experimental and Health Sciences
Universitat Pompeu Fabra
IMIM (Hospital del Mar Medical Research Institute)
C/Dr. Aiguader 88, 08003
Barcelona, Spain
Tel.: +34 93 316 0536 (1536)
E-mail: nquer...@imim.es <mailto:nquer...@imim.es>
Skype IM: nuriaqr76
http://ibi.imim.es/
********************************************************************


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--
********************************************************************
Núria Queralt Rosinach
Research Programme on Biomedical Informatics (GRIB)
Department of Experimental and Health Sciences
Universitat Pompeu Fabra
IMIM (Hospital del Mar Medical Research Institute)
C/Dr. Aiguader 88, 08003
Barcelona, Spain
Tel.: +34 93 316 0536 (1536)
E-mail:nquer...@imim.es
Skype IM: nuriaqr76
http://ibi.imim.es/
********************************************************************

--
********************************************************************
Núria Queralt Rosinach
Research Programme on Biomedical Informatics (GRIB)
Department of Experimental and Health Sciences
Universitat Pompeu Fabra
IMIM (Hospital del Mar Medical Research Institute)
C/Dr. Aiguader 88, 08003
Barcelona, Spain
Tel.: +34 93 316 0536 (1536)
E-mail: nquer...@imim.es
Skype IM: nuriaqr76
http://ibi.imim.es/
********************************************************************

------------------------------------------------------------------------------
Comprehensive Server Monitoring with Site24x7.
Monitor 10 servers for $9/Month.
Get alerted through email, SMS, voice calls or mobile push notifications.
Take corrective actions from your mobile device.
http://p.sf.net/sfu/Zoho
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