Hi Hugh,
My Java version is :
julien-plu@data:~$ java -version
java version "1.7.0_55"
Java(TM) SE Runtime Environment (build 1.7.0_55-b13)
Java HotSpot(TM) 64-Bit Server VM (build 24.55-b03, mixed mode)
And if I try with virtjdbc4.jar the same error occurs :
julien-plu@data:~$ javac -cp
"virtuoso-opensource/libsrc/JDBCDriverType4/virtjdbc4.jar:." Test.java
julien-plu@data:~$ java -cp
"virtuoso-opensource/libsrc/JDBCDriverType4/virtjdbc4.jar:." Test
virtuoso.jdbc4.VirtuosoException: Virtuoso Communications Link Failure
(timeout) : Connection to the server lost
at virtuoso.jdbc4.VirtuosoFuture.nextResult(VirtuosoFuture.java:63)
at
virtuoso.jdbc4.VirtuosoResultSet.process_result(VirtuosoResultSet.java:213)
at virtuoso.jdbc4.VirtuosoResultSet.<init>(VirtuosoResultSet.java:56)
at
virtuoso.jdbc4.VirtuosoPreparedStatement.<init>(VirtuosoPreparedStatement.java:33)
at
virtuoso.jdbc4.VirtuosoConnection.prepareStatement(VirtuosoConnection.java:736)
at
virtuoso.jdbc4.VirtuosoConnection.prepareStatement(VirtuosoConnection.java:674)
at virtuoso.jdbc4.VirtuosoConnection.<init>(VirtuosoConnection.java:171)
at virtuoso.jdbc4.Driver.connect(Driver.java:59)
at java.sql.DriverManager.getConnection(DriverManager.java:571)
at java.sql.DriverManager.getConnection(DriverManager.java:215)
at Test.main(Test.java:8)
julien-plu@data:~$ java -jar
virtuoso-opensource/libsrc/JDBCDriverType4/virtjdbc4.jar
OpenLink Virtuoso(TM) Driver for JDBC(TM) Version 4.x [Build 3.70]
My Virtuoso server is actually running and in the log I have just this
entry :
02:04:09 Malformed data received from IP [127.0.0.1] : Box length too
large. Disconnecting the client
Trace_on() and the option CallstackOnException setted at 2 don't give any
information in more than the line above.
Best
-------------------------------------------------------------------------------------------------------------------------------
Julien Plu
PhD Student at Eurecom.
Personal webpage: http://jplu.developpez.com
FOAF file : http://jplu.developpez.com/julien
Email address : julien....@redaction-developpez.com
Phone : +33493008200
Twitter : @julienplu
2014-07-14 2:06 GMT+02:00 Hugh Williams <hwilli...@openlinksw.com>:
>
> Hi Julien,
>
> Forgot to include my JDBC Driver version which is the same as yours as
> would be expected being from the repo:
>
> [virtuoso@masala vos]# java -jar
> /2d2/git/virt-develop7/libsrc/JDBCDriverType4/virtjdbc4_1.jar
> OpenLink Virtuoso(TM) Driver for JDBC(TM) Version 4.1 [Build 3.70]
>
> My Java version is:
>
> [virtuoso@masala vos]# java -version
> java version "1.7.0_05-icedtea"
> OpenJDK Runtime Environment (rhel-2.2.1.el6_3-x86_64)
> OpenJDK 64-Bit Server VM (build 23.0-b21, mixed mode)
>
> What is your java version ?
>
> Out of interest does the same problem occur using the "virtjdbc4.jar" file
> ?
>
> Does the Virtuoso server actually shutdown and is any error reported in
> the virtuoso.log file ?
>
> Note you can turn tracing on on the server with "trace_on()" [1] to get
> extra information in the Virtuoso log as to what are the last operations
> being performed. You can also enable the "CallStackOnExcpetion"[2] INI file
> param to potentially obtained more detailed errors on the client side.
>
> Best Regards
> Hugh Williams
> Professional Services
> OpenLink Software, Inc. // http://www.openlinksw.com/
> Weblog -- http://www.openlinksw.com/blogs/
> LinkedIn -- http://www.linkedin.com/company/openlink-software/
> Twitter -- http://twitter.com/OpenLink
> Google+ -- http://plus.google.com/100570109519069333827/
> Facebook -- http://www.facebook.com/OpenLinkSoftware
> Universal Data Access, Integration, and Management Technology Providers
>
> [1] http://docs.openlinksw.com/virtuoso/fn_trace_on.html
> [2]
> http://docs.openlinksw.com/virtuoso/handlingplcondit.html#stacktracesql
>
> On 13 Jul 2014, at 01:30, Julien Plu <julien....@redaction-developpez.com>
> wrote:
>
> > Hi Hugh,
> >
> > No, I didn't recompile the JDBC driver, I use it as it is from the
> repository, so here the same output than you but with the error :
> >
> > julien-plu@data:~$ javac -cp
> "virtuoso-opensource/libsrc/JDBCDriverType4/virtjdbc4_1.jar:." Test.java
> > julien-plu@data:~$ java -cp
> "virtuoso-opensource/libsrc/JDBCDriverType4/virtjdbc4_1.jar:." Test
> > virtuoso.jdbc4.VirtuosoException: Virtuoso Communications Link Failure
> (timeout) : Connection to the server lost
> > at virtuoso.jdbc4.VirtuosoFuture.nextResult(VirtuosoFuture.java:63)
> > at
> virtuoso.jdbc4.VirtuosoResultSet.process_result(VirtuosoResultSet.java:213)
> > at
> virtuoso.jdbc4.VirtuosoResultSet.<init>(VirtuosoResultSet.java:56)
> > at
> virtuoso.jdbc4.VirtuosoPreparedStatement.<init>(VirtuosoPreparedStatement.java:33)
> > at
> virtuoso.jdbc4.VirtuosoConnection.prepareStatement(VirtuosoConnection.java:738)
> > at
> virtuoso.jdbc4.VirtuosoConnection.prepareStatement(VirtuosoConnection.java:676)
> > at
> virtuoso.jdbc4.VirtuosoConnection.<init>(VirtuosoConnection.java:173)
> > at virtuoso.jdbc4.Driver.connect(Driver.java:59)
> > at java.sql.DriverManager.getConnection(DriverManager.java:571)
> > at java.sql.DriverManager.getConnection(DriverManager.java:215)
> > at Test.main(Test.java:8)
> > julien-plu@data:~$ java -jar
> virtuoso-opensource/libsrc/JDBCDriverType4/virtjdbc4_1.jar
> > OpenLink Virtuoso(TM) Driver for JDBC(TM) Version 4.1 [Build 3.70]
> > julien-plu@data:~$ cat Test.java
> > import java.sql.SQLException;
> > import java.sql.DriverManager;
> > import java.sql.Connection;
> >
> > public class Test {
> > public static void main(String[] args) {
> > try {
> > Connection conn =
> DriverManager.getConnection("jdbc:virtuoso://localhost:1111/", "dba",
> "dba");
> > } catch (SQLException ex) {
> > ex.printStackTrace();
> > }
> > }
> > }
> > julien-plu@data:~$ isql-v
> > OpenLink Interactive SQL (Virtuoso), version 0.9849b.
> > Type HELP; for help and EXIT; to exit.
> > SQL> status('');
> > Connected to OpenLink Virtuoso
> > Driver: 07.10.3211 OpenLink Virtuoso ODBC Driver
> > REPORT
> > VARCHAR
> >
> _______________________________________________________________________________
> >
> > OpenLink Virtuoso Server
> > Version 07.10.3211-pthreads for Linux as of Jul 11 2014
> > Started on: 2014-07-13 02:14 GMT+2
> >
> >
> >
> -------------------------------------------------------------------------------------------------------------------------------
> > Julien Plu
> >
> > PhD Student at Eurecom.
> > Personal webpage: http://jplu.developpez.com
> > FOAF file : http://jplu.developpez.com/julien
> > Email address : julien....@redaction-developpez.com
> > Phone : +33493008200
> > Twitter : @julienplu
> >
> >
> > 2014-07-13 1:50 GMT+02:00 Hugh Williams <hwilli...@openlinksw.com>:
> > Hi Julien,
> >
> > So this is a JDBC program indicating the JDBC driver (virtjdbc4_1.jar)
> is causing the issue, did you compile this from source also ?
> >
> > Running against the latest develop/7 build you sample program does run
> without error for me:
> >
> > [virtuoso@masala vos]# javac -cp
> "/2d2/git/virt-develop7/libsrc/JDBCDriverType4/virtjdbc4_1.jar:." Test.java
> > [virtuoso@masala vos]# java -cp
> "/2d2/git/virt-develop7/libsrc/JDBCDriverType4/virtjdbc4_1.jar:." Test
> > [virtuoso@masala vos]#
> > [virtuoso@masala vos]# more Test.java
> > import java.sql.*;
> > import java.sql.DriverManager;
> > import java.sql.Connection;
> >
> > public class Test {
> > public static void main(String[] args) {
> > try {
> > Connection conn =
> DriverManager.getConnection("jdbc:virtuoso://localhost:1234/", "dba",
> "dba");
> > } catch (SQLException ex) {
> > ex.printStackTrace();
> > }
> > }
> > }
> >
> > [root@masala vos]#
> >
> > [root@masala vos]# isql 1234
> > Connected to OpenLink Virtuoso
> > Driver: 07.10.3211 OpenLink Virtuoso ODBC Driver
> > OpenLink Interactive SQL (Virtuoso), version 0.9849b.
> > Type HELP; for help and EXIT; to exit.
> > SQL> status('');
> > REPORT
> > VARCHAR
> >
> _______________________________________________________________________________
> >
> > OpenLink Virtuoso Server
> > Version 07.10.3211-pthreads for Linux as of Jul 12 2014
> > Started on: 2014-07-13 01:14 GMT+2
> >
> > Best Regards
> > Hugh Williams
> > Professional Services
> > OpenLink Software, Inc. // http://www.openlinksw.com/
> > Weblog -- http://www.openlinksw.com/blogs/
> > LinkedIn -- http://www.linkedin.com/company/openlink-software/
> > Twitter -- http://twitter.com/OpenLink
> > Google+ -- http://plus.google.com/100570109519069333827/
> > Facebook -- http://www.facebook.com/OpenLinkSoftware
> > Universal Data Access, Integration, and Management Technology Providers
> >
> > On 11 Jul 2014, at 17:14, Julien Plu <
> julien....@redaction-developpez.com> wrote:
> >
> >> Hi Hugh,
> >>
> >> I use virtjdbc4_1.jar :
> >>
> >> java -jar
> ~/.m2/repository/com/openlinksw/virtuoso/virtjdbc/4.1/virtjdbc-4.1.jar
> >>
> >> And for virtjena, I recompiled it myself, I just changed the Jena
> version from 2.10.1 to 2.11.2. The classpath line that I used looks like
> this :
> >>
> >> JENA_CLASSPATH =
> .:lib/junit-4.5.jar:lib/jena-arq-2.11.2.jar:lib/jena-iri-1.0.2.jar:lib/jena-core-2.11.2.jar:lib/jena-core-2.11.2-tests.jar:$(top_srcdir)/libsrc/JDBCDriverType4/virtjdbc4_1.jar:lib/jcl-over-slf4j-1.7.6.jar:lib/log4j-1.2.17.jar:lib/slf4j-api-1.7.6.jar:lib/slf4j-log4j12-1.7.6.jar:lib/xercesImpl-2.11.0.jar:lib/xml-apis-1.4.01.jar
> >>
> >> And here a really simple piece of code which doesn't works :
> >>
> >> import java.sql.DriverManager;
> >> import java.sql.Connection;
> >>
> >> public class Test {
> >> public static void main(String[] args) {
> >> try {
> >> Connection conn =
> DriverManager.getConnection("jdbc:virtuoso://localhost:1111/", "user",
> "pass");
> >> } catch (SQLException ex) {
> >> ex.printStackTrace();
> >> }
> >> }
> >> }
> >>
> >> I have the exception :
> >>
> >> Exception in thread "main" virtuoso.jdbc4.VirtuosoException:
> Communications Link Failure (timeout):Connection to the server lost
> >>
> >> Only on the Virtuoso instance from develop branch.
> >>
> >> Best.
> >>
> >> Julien.
> >>
> >>
> >>
> -------------------------------------------------------------------------------------------------------------------------------
> >> Julien Plu
> >>
> >> PhD Student at Eurecom.
> >> Personal webpage: http://jplu.developpez.com
> >> FOAF file : http://jplu.developpez.com/julien
> >> Email address : julien....@redaction-developpez.com
> >> Phone : +33493008200
> >> Twitter : @julienplu
> >>
> >>
> >> 2014-07-11 18:17 GMT+02:00 Hugh Williams <hwilli...@openlinksw.com>:
> >>
> >> Hi Julien,
> >>
> >> Where did you get the "OpenLink Virtuoso(TM) Provider for Jena(TM)
> Version 2.10.1 [Build 1.10]" virt_jena2.jar from as when I check the in
> the git stable and develop 7 branches the version is 1.9:
> >>
> >> [virtuoso@masala git]# java -jar
> virt-develop7/binsrc/jena2/virt_jena2.jar
> >> OpenLink Virtuoso(TM) Provider for Jena(TM) Version 2.10.1 [Build 1.9]
> >> [virtuoso@masala git]# java -jar
> virt-stable7/binsrc/jena2/virt_jena2.jar
> >> OpenLink Virtuoso(TM) Provider for Jena(TM) Version 2.10.1 [Build 1.9]
> >>
> >> and the JDBC Driver versions are:
> >>
> >> [virtuoso@masala git]# java -jar
> virt-stable7/libsrc/JDBCDriverType4/virtjdbc4.jar
> >> OpenLink Virtuoso(TM) Driver for JDBC(TM) Version 4.x [Build 3.65]
> >> [virtuoso@masala git]# java -jar
> virt-develop7/libsrc/JDBCDriverType4/virtjdbc4.jar
> >> OpenLink Virtuoso(TM) Driver for JDBC(TM) Version 4.x [Build 3.70]
> >>
> >> Also, if you could a compilable/runnable program it would be useful for
> recreation attempt ...
> >>
> >> Best Regards
> >> Hugh Williams
> >> Professional Services
> >> OpenLink Software, Inc. // http://www.openlinksw.com/
> >> Weblog -- http://www.openlinksw.com/blogs/
> >> LinkedIn -- http://www.linkedin.com/company/openlink-software/
> >> Twitter -- http://twitter.com/OpenLink
> >> Google+ -- http://plus.google.com/100570109519069333827/
> >> Facebook -- http://www.facebook.com/OpenLinkSoftware
> >> Universal Data Access, Integration, and Management Technology Providers
> >>
> >> On 11 Jul 2014, at 15:45, Julien Plu <
> julien....@redaction-developpez.com> wrote:
> >>
> >> > Hi Hugh,
> >> >
> >> > Apparently, yes, it appears with Jena and the Virtuoso wrapper. I
> have also another problem with virtjena2, with my main Virtuoso instance
> (Virtuoso 7.1 stable), I can connect me via JDBC without any problems, but
> if I use another one (Virtuoso 7.1.1-dev, last version of the develo/7
> branch), the server disconnect me with the message :
> >> >
> >> > Malformed data received from IP [127.0.0.1] : Box length too large.
> Disconnecting the client
> >> >
> >> > Here the versions that I use, for JDBC :
> >> >
> >> > OpenLink Virtuoso(TM) Driver for JDBC(TM) Version 4.1 [Build 3.70]
> >> >
> >> > For virtjena2 :
> >> >
> >> > OpenLink Virtuoso(TM) Provider for Jena(TM) Version 2.10.1 [Build
> 1.10]
> >> >
> >> > I use these same jars for the connection on my stable version and on
> my develop version of Virtuoso.
> >> >
> >> > Is-it a bug of the develop version or I use these jars badly ?
> >> >
> >> > Best.
> >> >
> >> > Julien.
> >> >
> >> >
> >> > 2014-07-11 16:58 GMT+02:00 Hugh Williams <hwilli...@openlinksw.com>:
> >> > HI Julien,
> >> >
> >> > I see you reposted this question on the jena mailing list this I
> assume the problem occurs with the Jena storage engine also and is thus
> most likely in the Jena layer and Virtuoso ?
> >> >
> >> > Best Regards
> >> > Hugh Williams
> >> > Professional Services
> >> > OpenLink Software, Inc. //
> http://www.openlinksw.com/
> >> > Weblog -- http://www.openlinksw.com/blogs/
> >> > LinkedIn -- http://www.linkedin.com/company/openlink-software/
> >> > Twitter -- http://twitter.com/OpenLink
> >> > Google+ -- http://plus.google.com/100570109519069333827/
> >> > Facebook -- http://www.facebook.com/OpenLinkSoftware
> >> > Universal Data Access, Integration, and Management Technology
> Providers
> >> >
> >> > On 11 Jul 2014, at 14:48, Julien Plu <
> julien....@redaction-developpez.com> wrote:
> >> >
> >> >> Sorry a little mistake in the code :
> >> >>
> >> >> Model md = VirtModel.openDatabaseModel("http://example.com";, URL,
> USER, PASS);
> >> >>
> >> >> RDFDataMgr.read(md, Files.newInputStream(Paths.
> >> >> get("data.nq")), Lang.NQUADS);
> >> >>
> >> >>
> >> >>
> >> >> 2014-07-11 15:47 GMT+02:00 Julien Plu <
> julien....@redaction-developpez.com>:
> >> >> Hi,
> >> >>
> >> >> I'm trying to load a N-Quad file into Virtuoso but with the
> "virtjena" wrapper. What I'm doing is as simple as this :
> >> >>
> >> >> Model md = VirtModel.openDatabaseModel("http://example.com";, URL,
> USER, PASS);
> >> >>
> >> >> RDFDataMgr.read(md,
> Files.newInputStream(Paths.get(PrivacyDeployment.FILE)), Lang.NQUADS);
> >> >>
> >> >> But when I do this query inside the isql command prompt :
> >> >>
> >> >> SPARQL SELECT * FROM <http://example.com> WHERE {?s ?p ?o};
> >> >>
> >> >> Nothing is provided to me, 0 rows.
> >> >>
> >> >> Do-I something badly ?
> >> >>
> >> >> Best.
> >> >>
> >> >> Julien.
> >> >>
> >> >>
> ------------------------------------------------------------------------------
> >> >> Open source business process management suite built on Java and
> Eclipse
> >> >> Turn processes into business applications with Bonita BPM Community
> Edition
> >> >> Quickly connect people, data, and systems into organized workflows
> >> >> Winner of BOSSIE, CODIE, OW2 and Gartner awards
> >> >>
> http://p.sf.net/sfu/Bonitasoft_______________________________________________
> >> >> Virtuoso-users mailing list
> >> >> Virtuoso-users@lists.sourceforge.net
> >> >> https://lists.sourceforge.net/lists/listinfo/virtuoso-users
> >> >
> >> >
> >>
> >>
> >>
> ------------------------------------------------------------------------------
> >>
> >> _______________________________________________
> >> Virtuoso-users mailing list
> >> Virtuoso-users@lists.sourceforge.net
> >> https://lists.sourceforge.net/lists/listinfo/virtuoso-users
> >
> >
> >
> ------------------------------------------------------------------------------
> > _______________________________________________
> > Virtuoso-users mailing list
> > Virtuoso-users@lists.sourceforge.net
> > https://lists.sourceforge.net/lists/listinfo/virtuoso-users
>
>
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