Hi Hugh,

I shutdown virtuoso and deleted the database and re-ran the upload with 8 loaders the same way I did. Low and behold, the problem re-occurred the same way. Here is your status() below. I also checked top and virtuoso-t is at 100% at the moment. I'm not going to restart the server right since I need to go out for a bit. I will check to see if it corrects itself without the restart. I will let you know. - Erich

SQL> status();
REPORT
VARCHAR
_______________________________________________________________________________

OpenLink Virtuoso  Server
Version 07.00.3203-pthreads for Linux as of Sep 17 2013
Started on: 2013-09-22 18:19 GMT+0

Database Status:
  File size 9227468800, 1126400 pages, 304678 free.
5450000 buffers, 821582 used, 819838 dirty 11 wired down, repl age 0 0 w. io 1 w/crsr.
  Disk Usage: 60 reads avg 0 msec, 0% r 0% w last  583 s, 2158 writes,
    0 read ahead, batch = 0.  Autocompact 290 in 213 out, 26% saved.
Gate:  0 2nd in reads, 0 gate write waits, 0 in while read 0 busy scrap.
Log = /mnt/link/disk1/virtuoso-7.0.0/var/lib/virtuoso/db/virtuoso.trx, 21437 bytes
1796 pages have been changed since last backup (in checkpoint state)
Current backup timestamp: 0x0000-0x00-0x00
Last backup date: unknown
Clients: 10 connects, max 9 concurrent
RPC: 40 calls, -2 pending, 7 max until now, 0 queued, 21 burst reads (52%), 0 second 143M large, 2168M max
Checkpoint Remap 38 pages, 0 mapped back. 3 s atomic time.
    DB master 1126400 total 304678 free 38 remap 7 mapped back
   temp  256 total 251 free

Lock Status: 0 deadlocks of which 0 2r1w, 3169 waits,
   Currently 2 threads running 0 threads waiting 0 threads in vdb.
Pending:
  820: IER 68.195.227.26
      1: IER 68.195.227.26
  101: ISR 68.195.227.26
      1: ISR NO OWNER
      2: ISR NO OWNER
  20395: ISR 68.195.227.26
      115: ISR NO OWNER

Client 1111:2:  Account: dba, 357 bytes in, 325 bytes out, 1 stmts.
PID: 31218, OS: unix, Application: unknown, IP#: 127.0.0.1
Transaction status: PENDING, 1 threads.
Locks:


Running Statements:
 Time (msec) Text
         169 status()


Hash indexes


44 Rows. -- 170 msec.
SQL>

            - Erich

On 09/22/13 8:32 AM, Hugh Williams wrote:
Hi Erich,

Is this condition reproducible as a restart of the server seems to have resolved it ? As it would be interesting to see what the "status();" command reports as to the status of the Virtuoso server when in this state ...

Best Regards
Hugh Williams
Professional Services
OpenLink Software, Inc.      // http://www.openlinksw.com/
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Universal Data Access, Integration, and Management Technology Providers

On 22 Sep 2013, at 05:32, Erich Bremer <er...@ebremer.com <mailto:er...@ebremer.com>> wrote:

Hi all,

I'm working with Virtuoso 7.0.0 open source edition and did a load of
geonames data using isql which was 123,020,822 triples into a named
graph "http://www.geonames.org";.

I did a second load of 13,349,346 triples into a different named graph.
Both loads of turtle RDF completed quickly.  When I went to check to see
if Conductor could see the named graphs, Conductor hung when I clicked
on Linked Data-->Graphs.  I then tried to do:

a) select distinct ?g where {graph ?g {?s ?p ?o}}

from the SPARQL endpoint and it timed out.

however, the following query against http://www.geonames.org would work
in a second:

b) select count(*) as ?cc where {?s ?p ?o}

I initiated a shutdown using isql which took a few moments and then I
restarted virtuoso.  Now, Conductor quickly shows all named graphs
including the new ones, and the above SPARQL query (a) runs nearly
instantly.

                    - Erich

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