Hello, I am running Virtuoso 5.0.6 on Mac OX 10.5. I am executing queries against Virtuoso using Jena 2.5.4. When I run queries that are short (fewer than about 10 lines), they run fine. However, it looks like the longer queries are getting truncated. I have copied the output from the command window running the server. The "compile text" step in the command line contains the entire SPARQL query. However, it is truncated at the "Exec" step. Then my query never returns its results. Below is the output from the command line. Is there a problem with a driver?
14:56:10 COMP_2 0 127.0.0.1 1112:12 Compile text: sparql PREFIX sc: <http://purl.org/science/owl/sciencecommons/> PREFIX dc: <http://purl.org/dc/elements/1.1/> PREFIX mesh: <http://purl.org/commons/record/mesh/> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> SELECT DISTINCT ?genename ?gene WHERE { GRAPH <http://purl.org/commons/hcls/pubmesh> { ?pubmed sc:has-as-major-mesh mesh:D000544Q000235 . ?article_gene sc:describes_gene_or_gene_product_mentioned_by ?article . ?article sc:identified_by_pmid ?pubmed . } GRAPH <http://purl.org/commons/hcls/gene> { ?gene rdfs:label ?genename .} GRAPH <http://sw.brainstage.com/homologene> { ?homologous_gene_record sc:has_homologous_gene_record ?article_gene ; sc:has_homologous_gene_record ?gene . } } 14:56:10 EXEC_1 0 127.0.0.1 1112:12 s55 Exec 1 time(s) sparql PREFIX sc: <http://purl.org/science/owl/sciencecommons/> PREFIX dc: <http://purl.org/dc/elements/1.1/> PREFIX mesh: <http://purl.org/commons/record/mesh/> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> SELECT DISTINCT ?genename ?gene WHERE { GRAPH <http://purl.org/commons/hcls/pubmesh> { ?pubmed sc:has-as-major-mesh mesh:D000544Q000235 . ?article_gene sc:describes_gene_or_gene_product_mentioned_by ?article . ?article sc:identi
