I have a somewhat similar experience; there seem to be multiple bugs
reported on Launchpad surrounding such issues (e.g. <a
href="https://bugs.launchpad.net/ubuntu/+source/xserver-xorg-video-
intel/+bug/177492">#177492</a>), but this one seems to come closest. I'm
on Hardy (fully updated), I'll attach my Xorg.0.log here.

Though I did notice the slowdown in scrolling with Firefox occasionally,
I've since switched to using mainly Epiphany, and have found it to be
much more susceptible to the same issue: after some time, scrolling
becomes horribly sluggish. The CPU usage monitor I've added to my panel
shows it's 100% during the scrolling. Once this happens, the issue
remains until I either log out and back in, use fusionicon to 'Reload
Window Manager', or disable desktop effects. Re-enabling them within the
same session immediately re-introduces the problem.

However, I'm using swfdec for flash, so at least in that respect this is
different from the original report. I'm also unable to reproduce this at
will; it does seem to happen multiple times a day, but I haven't found
any particular website which would consistently trigger it (the URL
given by the initial reporter doesn't do it either).

This morning I booted the Intrepid alpha 4 Live CD. Changed the
xorg.conf there to match my production environment (verified from
Xorg.0.log that it was indeed using EXA and "greedy" for
MigrationHeuristic), installed Epiphany and swfdec, then played around
with Firefox and Epiphany for a while, trying to trigger this, but
didn't manage to do so. Either the issue is fixed in Intrepid, or I just
didn't happen to come across it during my testing.


** Attachment added: "Xorg.0.log"
   http://launchpadlibrarian.net/17134711/Xorg.0.log

-- 
firefox-3.0 scrolls jerkily with ATI driver, EXA and compiz
https://bugs.launchpad.net/bugs/213734
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