I am also experiencing this bug with the same 64-bit build of Eclipse
and OpenJDK, though with PyDev 1.3.20.

# An unexpected error has been detected by Java Runtime Environment:
#
#  SIGSEGV (0xb) at pc=0x00007f2980599bc4, pid=26447, tid=1092757840
#
# Java VM: OpenJDK 64-Bit Server VM (1.6.0_0-b11 mixed mode linux-amd64)
# Problematic frame:
# V  [libjvm.so+0x227bc4]

Current CompileTask:
C2:509      
org.python.pydev.editor.codecompletion.revisited.PythonPathHelper.isValidSourceFile(Ljava/lang/String;)Z
 (43 bytes)

-- 
VM crashes while PyDev scans the system Python libraries
https://bugs.launchpad.net/bugs/258088
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