The biggest thing I notice is that you're booting linux-386 in one case
and linux-generic in the other. linux-generic should be the default on a
fresh install; I don't suppose that using linux-386 instead makes any
difference?
(I've attached a more digestible form of your diff.)

** Attachment added: "dpkg-diff.txt"
   http://launchpadlibrarian.net/14013523/dpkg-diff.txt

** Changed in: ubiquity (Ubuntu)
     Assignee: Colin Watson (kamion) => (unassigned)

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Fresh Install Creates Broken Kernel, dist-upgrading From Edgy Works Fine
https://bugs.launchpad.net/bugs/96565
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