Can you test if adding those modules again will make the system boot?
Please create `/etc/initramfs-tools/hooks/more-modules` with following
content:

```
#!/bin/sh

PREREQ=""

prereqs()
{
        echo "$PREREQ"
}

case $1 in
# get pre-requisites
prereqs)
        prereqs
        exit 0
        ;;
esac

. /usr/share/initramfs-tools/hook-functions

manual_add_modules vhost_iotlb tap fpga-bridge
```

Then make that config executable:

```
sudo chmod +x /etc/initramfs-tools/hooks/more-modules
```

Then regenerate the initrd and diff the content again and test if that
works.

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https://bugs.launchpad.net/bugs/2076912

Title:
  broken initrd.img after upgrade to 24.04

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