I've upgraded my laptop from Dapper to Edgy today, and Firefox works nicely 
with https links, either typing them directly in the address bar, or clicking 
on a link.
It works nicely on my desktop PC too, but I've been on Edgy for a longer time.

I've not tried from Thunderbird, as I'm using Evolution (but it works
using Evolution links).

Version : Mozilla/5.0 (X11; U; Linux i686; fr; rv:1.8.1b2)
Gecko/20060601 BonEcho/2.0b2 (Ubuntu-edgy)

Maybe you should completely remove firefox package (sudo apt-get --purge
remove firefox) and remove firefox profile directories (rm -r ~/.mozilla
~/.firefox), then install firefox again.

If that doesn't work, I'd try using another source for links (i.e. click
on links from another software than Thunderbird) as the bug may be
somewhere else...

-- 
https doesn't work.
https://launchpad.net/bugs/61660

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