This was fixed in initramfs-tools version 0.123 which is available in
Zesty and later releases.  The fix should be SRU'ed to both Ubuntu 14.04
and Ubuntu 16.04 which are affected.  Here's a link to the commit which
fixed this:

https://anonscm.debian.org/cgit/kernel/initramfs-
tools.git/commit/?id=ac6d31fc2c707b72ff8af9944c9b4f8af303a6a3

** Also affects: initramfs-tools (Ubuntu Trusty)
   Importance: Undecided
       Status: New

** Also affects: initramfs-tools (Ubuntu Xenial)
   Importance: Undecided
       Status: New

** Changed in: initramfs-tools (Ubuntu)
       Status: Confirmed => Fix Released

** Changed in: initramfs-tools (Ubuntu Trusty)
   Importance: Undecided => High

** Changed in: initramfs-tools (Ubuntu Xenial)
   Importance: Undecided => High

** Changed in: initramfs-tools (Ubuntu Trusty)
       Status: New => Triaged

** Changed in: initramfs-tools (Ubuntu Xenial)
       Status: New => Triaged

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https://bugs.launchpad.net/bugs/1713004

Title:
  Temporary files left under /var/tmp by mkinitramfs

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