This should be fixed in Zesty now:
unattended-upgrades (0.93.1) unstable; urgency=medium
[ Brian Murray ]
* Create logfile_dpkg if it doesn't exist
* Make sure the statedir exists too
* ensure network and local-fs are available in shutdown
...
-- Michael Vogt <m...@debian.org> Sun, 11 Dec 2016 11:31:26 +0100
** Changed in: unattended-upgrades (Ubuntu)
Status: Triaged => Fix Released
** Also affects: unattended-upgrades (Ubuntu Yakkety)
Importance: Undecided
Status: New
** Also affects: unattended-upgrades (Ubuntu Xenial)
Importance: Undecided
Status: New
** Changed in: unattended-upgrades (Ubuntu Xenial)
Status: New => Triaged
** Changed in: unattended-upgrades (Ubuntu Yakkety)
Status: New => Triaged
** Changed in: unattended-upgrades (Ubuntu Xenial)
Importance: Undecided => Medium
** Changed in: unattended-upgrades (Ubuntu Yakkety)
Importance: Undecided => Medium
** Changed in: unattended-upgrades (Ubuntu Xenial)
Milestone: None => ubuntu-16.04.2
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https://bugs.launchpad.net/bugs/1618900
Title:
[Xenial/0.90] Systemd dependencies issues when used in "Shutdown mode"
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