Can you give the latest upstream 4.8 kernel a try as well?  It is available 
from:
http://kernel.ubuntu.com/~kernel-ppa/mainline/v4.8.4/

We may have to perform a kernel bisect between the 3.13 and 4.4 kernels
if the bug is not fixed in 4.8.4.

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https://bugs.launchpad.net/bugs/1633634

Title:
  sr-iov not working on ubuntu 16.04 kvm

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