I had the same issue.

After commenting out the following lines from /usr/share/pam-configs
/smbpasswd-migrate, and re-running pam-auth-update, all worked again:

#Auth-Type: Additional
#Auth-Initial:
#       optional                        pam_smbpass.so migrate
#Auth-Final:
#       optional                        pam_smbpass.so migrate

The relevant lines cause synchronization of samba passwords
_when_user_logs_in_ to any service, rather than just when he changes
passwords. In a steady state system, this is unneeded (Samba password
only needs to change when Unix password changes as well).

I vaguely remember other such issues in the past with these lines. Maybe
they shouldn't be included by default, or be present in a separate pam-
config, to make it easier to disable them independently of the rules in
the "Password" chain?

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https://bugs.launchpad.net/bugs/1571883

Title:
  libpam-smbpass:amd64 (2:4.3.8+dfsg-0ubuntu0.14.04.2) causes PAM
  failure for dovecot

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