What's your VSS snapshot frequency? Increasing it you can shorten the tests as 
the problem should appear earlier.
I'm doing the snapshot every 15 minutes. Just snapshots, no need to do a full 
backup.  In my case a snapshot made for any reason (branching, moving to 
different host etc.) was causing the issue with similar probability.

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https://bugs.launchpad.net/bugs/1470250

Title:
  [Hyper-V] Ubuntu 14.04.2 LTS Generation 2 SCSI Errors on VSS Based
  Backups

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