Some more info in the hope it helps the developers to make sense of this
issue:-

I managed to restore the "Boot via CD/DVD" option by shorting the said
CL1 and CL2 pins. However this did not restore my BIOS/UEFI firmware
access. I was just able to use the 'Boot via CD/DVD' and 'Boot via USB
HDD' options. Using the former, I installed Linux Mint 14. Deleted the
EFI system partition and installed grub-pc to handle the boot loading
process.

Later used the manufacturer's BIOS Flash via FreeDOS to flash my
firmware and get back firmware access.

Windows 8.1 preview arrived and I wanted to check it out so went ahead
and grabbed the ISO. Since Windows doesn't allow BIOS mode installation
on a GPT disk, I had to go for a UEFI mode installation. This went as
expected and removed the grub loader. However the firmware access was
still there. Installing UEFI Windows just added a 'Windows Boot loader'
in the firmware's boot menu and put it on top. I was still able to
choose boot via CD or USB.

Put in the Ubuntu Live CD and booted through that to restore access to
Ubuntu/Mint. Installed Boot-Repair and used the 'Recommended Repair'
approach. Now since there is a EFI System Partition (Windows created
this) and UEFI mode OSes (Windows 8.1 and Ubuntu), I guess, Boot-Repair
figured out that grub-efi needs to be installed. Followed instructions
shown by Boot-Repair and the summary is present here -
http://paste.ubuntu.com/5873309/

I was asked to disable 'Secure Boot' from my firmware on restart but as
earlier, I lost firmware access again. I guess, grub-efi failed
somewhere and I was being taken directly to the grub menu with no way to
enter my firmware and switch off Secure Boot.

Since I have a working Windows, I booted into it via grub and flashed my
BIOS again to get back firmware access.

I stumbled upon the utility - rEFInd Boot Manager by Roderick W. Smith
here - http://www.rodsbooks.com/refind/ and using the instructions for
Windows (http://www.rodsbooks.com/refind/installing.html#windows), I
installed it and now have a working system with access to all OSes
(Windows 8.1, Ubuntu and Mint) along with my BIOS/UEFI firmware access
as well (restored via flashing).

When my Windows 8.1 preview expires, I will have some work to do
probably but I'll cross that bridge when I come to it.

To Developers:- Just holler if you need me to run any tests or provide
more info.

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https://bugs.launchpad.net/bugs/1082418

Title:
  Ubuntu UEFI install locks out UEFI firmware (~bios) access

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