I've uploaded the fix to Raring which will become Ubuntu release 13.04.
If you would like to see this fixed in Ubuntu 12.04 please fill out
Stable Release Update information for this bug report following the
guidelines at http://wiki.ubuntu.com/StableReleaseUpdates and I'll be
happy to get this uploaded to Precise for you.  Thanks!

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https://bugs.launchpad.net/bugs/1027075

Title:
  SSL support broken, despite SSL support in command line mysql client

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