I ran into a similar problem - the system wouldn't boot, but stop at some USB 
HID message, or it would drop me into
busybox (similar to Arthur's case here).  Turned out it was because I had 
edited /etc/initramfs-tools/initramfs.conf,
and set BOOT=nfs instead of BOOT=local (for building an initramfs for use on a 
different system).  Reverting and
dpkg-recongfigure initramfs-tools fixed it for me.  Perhaps dpkg could check 
whether this setting is appropriate for the
currently runnings system, and if not, print a warning message?

-k

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Mount Root Files System Failed
https://bugs.launchpad.net/bugs/47768
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