I encountered the same problem. You can get around it by setting the window that you want to use to "always on top".
-- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/1037864 Title: Sikuli does not work with Ubuntu unity 2d To manage notifications about this bug go to: https://bugs.launchpad.net/ubuntu/+source/sikuli/+bug/1037864/+subscriptions -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs