By the way, I've tested the latest IPython (0.13-1) with mathjax 2.0-2
and it works fine for me (http://ubuntuone.com/1sIbDRC4phy33We9fHqWHZ).

The only error I get is:
WARNING:root:404 GET /mathjax/images/MenuArrow-15.png (127.0.0.1) 2.45ms,
this is something that I think should be addressed in IPython.

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https://bugs.launchpad.net/bugs/1033170

Title:
  Please sync mathjax 2.0-2 from Debian experimental (main)

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