I see a similar problem running 32 bit ubuntu 12.04. I am using a 4GB
compact flash card as my root drive. When I do a dumpe2fs /dev/sda1 I
see FIlesystem state: not clean. The motherboard is zotac itx. I can
provide more details if needed.
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https://bugs.launchpad.net/bugs/998512

Title:
  Checking disk drives for errors at every boot

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