Bug still exists in general, but seems to have changed. Do something
like

lvcreate -L 40M -n dummy vg1

parted /dev/vg1/dummy
mklabel msdos     
mkpart primary 1 2
mkpart primary 2 3
quit

parted /dev/vg1/dummy
rm 1
quit

and you will get several error messages. However, the commands are
executed, although the confirmation requests make it impossible to run
them from a shell script.

regards

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https://bugs.launchpad.net/bugs/611717

Title:
  parted fails to remove partitions from lvm disk

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