Yes, I think the VNC issues may just complicate matters.

At this point it sounds like it is still unconfirmed what precise combination 
causes this problem.
Options:

Compiler - people have said that upstream works, but as far as I can tell 
no-one has tried a matching version (i.e. 2.5.0.0 upstream). James attempted to 
but had further package configuration problems that prevented him seeing it 
through.
Runtime - am I write in saying no-one has this problem (i.e. sees notification 
windows without a crash) with Java 6? Thom seems to say that he did have a 
problem with Java 6 in the past, I believe I did, but have lost track of the 
versions and package updates recently - been moving and am without net 
connection on linux pc.
Code - it is genuinely fixed somewhere in the 2.5.0.0 -> 2.5.0.4 transition 
(i.e. on all configurations)
Packaging etc. - not likely but possible.

I did download the source and get it into Eclipse but couldn't find a
way to get it running under GCJ (or Sun, whichever is not
recommended/easiest) - does anyone have experience of testing Azureus
with different compiler/JRE combinations?

-- 
Azureus crashes just after startup (attempt to show sliding notification window)
https://bugs.launchpad.net/bugs/68020
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