I don't know is it the same bug but happens with banshee too. The application appears to be painted only, I can click through, see the screenshot.
** Attachment added: "screenBug.png" https://bugs.launchpad.net/unity-2d/+bug/800599/+attachment/2249431/+files/screenBug.png -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/800599 Title: OpenGL windows always on top with Unity-2D and fglrx driver To manage notifications about this bug go to: https://bugs.launchpad.net/unity-2d/+bug/800599/+subscriptions -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs