@ John Johansen
I haven't made any modifications as far as aa is concerned. I have had this 
Ubuntu installation since Nov 2010 and never looked into aa.
I'm attaching apparmor tarball - contents of /etc/apparmor and dmesg.txt 

@Steve Beattie
I checked the files that Ubuntu's apparmor package provides and there aren't 
any rc*d scripts, only an init.d  one.
In any case rcd tarball containc all rc*d contents and init.d to boot.

@both. I am happy you responded so promptly.
@both. It seems I can only attach one file per comment.

** Attachment added: "dmesg.txt"
   
https://bugs.launchpad.net/ubuntu/+source/apparmor/+bug/805731/+attachment/2196428/+files/dmesg.txt

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https://bugs.launchpad.net/bugs/805731

Title:
  aa doesn't load profiles on startup

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