The comments in 
<http://comments.gmane.org/gmane.comp.version-control.git/146847> say that this 
bug is probably related to
<https://bugs.launchpad.net/ubuntu/+source/linux/+bug/490005>, especially 
<https://bugs.launchpad.net/ubuntu/+source/linux/+bug/490005/comments/23>.

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ecryptfs sometimes seems to add trailing garbage to encrypted files
https://bugs.launchpad.net/bugs/509180
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