In my opinion this is fixed.
example:
Enter a number to change any of them or press ENTER to continue: 3
Enter new version:
>> 0.12 3
*** Warning: The package version "0.12 3" is not a
*** Warning: debian policy compliant one. Please specify an alternate one
Don't know if you have an example of an invalid version number that does not
trigger a warning?
Changing status to fix-released (at least for Lucid it is.)
** Changed in: checkinstall (Ubuntu)
Status: Triaged => Fix Released
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checkinstall should validate the Debian version number field
https://bugs.launchpad.net/bugs/163969
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