I seem to forgotten to mention I in fact use LDAP for PAM and NSS on the
machine I have issues with. The fresh install didn't use LDAP.

Lars: The segfault is probably due to bug #439655, which has been fixed
upstream. If you see 'Only uid 0 may invoke this method. This incident
has been logged.' in you log, it is related to this bug.

-- 
Policykit authentication fails with 'Error.Failed: Only uid 0 may invoke this 
method.'
https://bugs.launchpad.net/bugs/439552
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