Ricardo,

You could check whether these commands spin up the disk on your system:

$ sudo /usr/lib/devicekit-disks/devkit-disks-helper-ata-smart-collect /dev/sdX 1
$ sudo /usr/lib/devicekit-disks/devkit-disks-helper-ata-smart-collect /dev/sdX 0

(replace sdX with your disk device)

-- 
Disk wakes up every 30 minutes and produces errors on dmesg
https://bugs.launchpad.net/bugs/435190
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