I can confirm this exact behaviour on Edgy: There are three possible outcomes 
to a 'addcardkey' command:
-  error (exactly same as original poster)
-  segfault (this actually comes after the key generation succeeds -- the 
results aren't saved in the keyring though)
-  success (this is rare, very rare)


My card reader info: 
*  idVendor           0x04e6 SCM Microsystems, Inc.
*  idProduct          0x5116 SCR331-LC1 SmartCard Reader


This may be of interest:
http://lists.gnupg.org/pipermail/gnupg-devel/2004-October/021422.html

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segfault when running addcardkey for OpenPGP smartcard
https://launchpad.net/bugs/78120

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