I was just about to open a bug for this problem when I bump into this
report. As said by @EmmaJane, this happens when gnome-sessions is set to
restore the previously running applications.

This is still happening in 15.5 (karmic version, I hope apport-collect has 
attached all the necessary info).
I have attached the file generated by gnome-session (located in 
"~/.config/gnome-session/saved-session/").


** Attachment added: ".desktop file generated by gnome-session for restoring 
tomboy"
   
http://launchpadlibrarian.net/30794948/10d4a1cdc8e8ba7df5125117274738442100000116750025.desktop.renameMe

-- 
Ubuntu 9.04 - Tomboy - boot - OAFIID:error
https://bugs.launchpad.net/bugs/379839
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