I am still seeing exactly this bug in up-to-date jaunty 64-bit.
I recently recompiled my own kernel to get a patch I wanted. After
installing the custom-built kernel packages, they popped up as
upgradeable in update-manager. I pinned them in synaptic (using 'lock
package'), and they still show up as upgradeable. Since the most recent
kernel upgrade was a security fix, this means that update-manager opens
itself every day.
** Changed in: update-manager (Ubuntu)
Status: Fix Released => New
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pinned packages appear as upgradeable
https://bugs.launchpad.net/bugs/13408
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