I have the similar problem on my home computer. I have SB600 SATA controller 
and see "softreset failed" messages during startup.
My Ubuntu 9.04 x64 works fine but I have soft-RAID 5 (mdadm) and this raid 
start recalculation of all checksumms on each reboot. On this moment I just 
keep my computer online whole day.
I will provide technical details later.

I hope this but will be fixed soon.

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Softreset failed (device not ready)
https://bugs.launchpad.net/bugs/285392
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