I believe I am also encountering this bug.  Running Mythbuntu 9.04 Beta
I find my recording schedule on mythtv is empty after reboot.  Running
mythtv-setup, removing all encoder cards and adding them again fixes
this.

Output of "cat syslog | grep mysqld":

Apr 19 11:54:05 barney mysqld[3497]: 090419 11:54:05 [Note] /usr/sbin/mysqld: 
Normal shutdown
Apr 19 11:54:05 barney mysqld[3497]: 
Apr 19 11:54:07 barney mysqld[3497]: 090419 11:54:07  InnoDB: Starting 
shutdown...
Apr 19 11:54:08 barney mysqld[3497]: 090419 11:54:08  InnoDB: Shutdown 
completed; log sequence number 0 150426
Apr 19 11:54:08 barney mysqld[3497]: 090419 11:54:08 [Note] /usr/sbin/mysqld: 
Shutdown complete
Apr 19 11:54:08 barney mysqld[3497]: 
Apr 19 11:54:08 barney mysqld_safe[5352]: ended
Apr 19 11:54:48 barney kernel: [   11.333672] type=1505 
audit(1240160086.411:8): operation="profile_load" name="/usr/sbin/mysqld" 
name2="default" pid=1969
Apr 19 11:54:49 barney mysqld_safe[2496]: started
Apr 19 11:54:49 barney mysqld[2500]: 090419 11:54:49  InnoDB: Started; log 
sequence number 0 150426
Apr 19 11:54:50 barney mysqld[2500]: 090419 11:54:50 [Note] /usr/sbin/mysqld: 
ready for connections.
Apr 19 11:54:50 barney mysqld[2500]: Version: '5.0.75-0ubuntu10'  socket: 
'/var/run/mysqld/mysqld.sock'  port: 3306  (Ubuntu)
Apr 19 11:55:03 barney mysqld_safe[3605]: Number of processes running now: 1
Apr 19 11:55:03 barney mysqld_safe[3613]: mysqld process hanging, pid 2498 - 
killed
Apr 19 11:55:03 barney mysqld_safe[3616]: restarted
Apr 19 11:55:03 barney mysqld[3620]: InnoDB: The log sequence number in ibdata 
files does not match
Apr 19 11:55:03 barney mysqld[3620]: InnoDB: the log sequence number in the 
ib_logfiles!
Apr 19 11:55:03 barney mysqld[3620]: 090419 11:55:03  InnoDB: Database was not 
shut down normally!
Apr 19 11:55:03 barney mysqld[3620]: InnoDB: Starting crash recovery.
Apr 19 11:55:03 barney mysqld[3620]: InnoDB: Reading tablespace information 
from the .ibd files...
Apr 19 11:55:03 barney mysqld[3620]: InnoDB: Restoring possible half-written 
data pages from the doublewrite
Apr 19 11:55:03 barney mysqld[3620]: InnoDB: buffer...
Apr 19 11:55:03 barney mysqld[3620]: 090419 11:55:03  InnoDB: Started; log 
sequence number 0 150436
Apr 19 11:55:03 barney mysqld[3620]: 090419 11:55:03 [Note] /usr/sbin/mysqld: 
ready for connections.
Apr 19 11:55:03 barney mysqld[3620]: Version: '5.0.75-0ubuntu10'  socket: 
'/var/run/mysqld/mysqld.sock'  port: 3306  (Ubuntu)

-- 
mysql thinks it has crashed when it hasn't
https://bugs.launchpad.net/bugs/326768
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